RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 RASAL3Q86YV0 1011 aa15.29■□□□□ 0.04
YIPF3-203ENST00000416380 ZKSCAN4Q969J2 545 aaPredicted RBP15.29■□□□□ 0.04
YIPF3-203ENST00000416380 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
YIPF3-203ENST00000416380 PI4KBQ9UBF8 816 aa15.29■□□□□ 0.04
YIPF3-203ENST00000416380 SLC4A4Q9Y6R1 1079 aa15.29■□□□□ 0.04
YIPF3-203ENST00000416380 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
YIPF3-203ENST00000416380 PPP1R12BO60237 982 aaPredicted RBP15.28■□□□□ 0.04
YIPF3-203ENST00000416380 SLC10A3P09131 477 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 SHMT1P34896 483 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 DEFB115Q30KQ5 88 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 NOL9Q5SY16 702 aaKnown RBP15.28■□□□□ 0.04
YIPF3-203ENST00000416380 RGMBQ6NW40 437 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 IFNL3Q8IZI9 196 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 ZNF341Q9BYN7 854 aa15.28■□□□□ 0.04
YIPF3-203ENST00000416380 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
YIPF3-203ENST00000416380 USP17L21D6R901 530 aa15.27■□□□□ 0.04
YIPF3-203ENST00000416380 NF2P35240 595 aa15.27■□□□□ 0.04
YIPF3-203ENST00000416380 USP5P45974 858 aa15.27■□□□□ 0.04
YIPF3-203ENST00000416380 ALX1Q15699 326 aa15.27■□□□□ 0.04
YIPF3-203ENST00000416380 LRRFIP1Q32MZ4 808 aaKnown RBP15.27■□□□□ 0.04
YIPF3-203ENST00000416380 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.04
YIPF3-203ENST00000416380 JMYQ8N9B5 988 aa15.27■□□□□ 0.04
YIPF3-203ENST00000416380 ABT1Q9ULW3 272 aaKnown RBP15.27■□□□□ 0.04
YIPF3-203ENST00000416380 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.03
YIPF3-203ENST00000416380 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 HSPD1P10809 573 aaKnown RBP15.26■□□□□ 0.03
YIPF3-203ENST00000416380 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 DCAF15Q66K64 600 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 ARMC9Q7Z3E5 817 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 ANKRD13AQ8IZ07 590 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 WRNIP1Q96S55 665 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 NBPF3Q9H094 633 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.26■□□□□ 0.03
YIPF3-203ENST00000416380 HERC5Q9UII4 1024 aaKnown RBP15.26■□□□□ 0.03
YIPF3-203ENST00000416380 LAMB1P07942 1786 aa15.26■□□□□ 0.03
YIPF3-203ENST00000416380 CCDC171Q6TFL3 1326 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 WDR33Q9C0J8 1336 aaKnown RBP15.25■□□□□ 0.03
YIPF3-203ENST00000416380 SGSM2O43147 1006 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 AOC2O75106 756 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 GNAT2P19087 354 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 GUCY1A2P33402 732 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
YIPF3-203ENST00000416380 MOGSQ13724 837 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 SPRYD7Q5W111 196 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
YIPF3-203ENST00000416380 ZSCAN29Q8IWY8 852 aaPredicted RBP15.25■□□□□ 0.03
YIPF3-203ENST00000416380 SLC44A5Q8NCS7 719 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 HOOK2Q96ED9 719 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 DYNLL2Q96FJ2 89 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
YIPF3-203ENST00000416380 ZMYM6O95789 1325 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 SPDYE5A6NIY4 337 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 FGAP02671 866 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 FGRP09769 529 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 CAP2P40123 477 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 C16orf86Q6ZW13 317 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 WNK4Q96J92 1243 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 MS4A4AQ96JQ5 239 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
YIPF3-203ENST00000416380 SERPINB13Q9UIV8 391 aa15.24■□□□□ 0.03
YIPF3-203ENST00000416380 MYH1P12882 1939 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 HIP1O00291 1037 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
YIPF3-203ENST00000416380 ZNF157P51786 506 aaPredicted RBP15.23■□□□□ 0.03
YIPF3-203ENST00000416380 TTC6Q86TZ1 520 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 SCYL3Q8IZE3 742 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.23■□□□□ 0.03
YIPF3-203ENST00000416380 ANAPC4Q9UJX5 808 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
YIPF3-203ENST00000416380 BAZ2AQ9UIF9 1905 aaKnown RBP15.22■□□□□ 0.03
YIPF3-203ENST00000416380 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
YIPF3-203ENST00000416380 PTPRAP18433 802 aa15.22■□□□□ 0.03
YIPF3-203ENST00000416380 PTH1RQ03431 593 aa15.22■□□□□ 0.03
YIPF3-203ENST00000416380 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
YIPF3-203ENST00000416380 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
YIPF3-203ENST00000416380 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
YIPF3-203ENST00000416380 CCDC102AQ96A19 550 aa15.22■□□□□ 0.03
YIPF3-203ENST00000416380 ARPP21Q9UBL0 812 aaPredicted RBP15.22■□□□□ 0.03
YIPF3-203ENST00000416380 KCNH4Q9UQ05 1017 aa15.22■□□□□ 0.03
YIPF3-203ENST00000416380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
YIPF3-203ENST00000416380 PHIPQ8WWQ0 1821 aa15.22■□□□□ 0.03
YIPF3-203ENST00000416380 RAD50Q92878 1312 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 HLA-DOAP06340 250 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 ZBTB48P10074 688 aaPredicted RBP15.21■□□□□ 0.03
YIPF3-203ENST00000416380 CDK8P49336 464 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 OPTNQ96CV9 577 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 SLC10A4Q96EP9 437 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 PTPN18Q99952 460 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 INCENPQ9NQS7 918 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 DIAPH3Q9NSV4 1193 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 AFG3L2Q9Y4W6 797 aa15.21■□□□□ 0.03
YIPF3-203ENST00000416380 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
YIPF3-203ENST00000416380 IRF6O14896 467 aa15.2■□□□□ 0.02
YIPF3-203ENST00000416380 POLR3DP05423 398 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms