RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 PPP1R1BQ9UD71 204 aaPredicted RBP21.18■□□□□ 0.98
RTN4R-202ENST00000416372 SAP30BPQ9UHR5 308 aaKnown RBP21.18■□□□□ 0.98
RTN4R-202ENST00000416372 KIF3AQ9Y496 699 aa21.18■□□□□ 0.98
RTN4R-202ENST00000416372 SCN9AQ15858 1988 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 CPLX1O14810 134 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 ZBTB43O43298 467 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 F13A1P00488 732 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 POLR3DP05423 398 aaPredicted RBP21.17■□□□□ 0.98
RTN4R-202ENST00000416372 METAP2P50579 478 aaKnown RBP eCLIP21.17■□□□□ 0.98
RTN4R-202ENST00000416372 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 SYNE3Q6ZMZ3 975 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 TEKT1Q969V4 418 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 SLC12A7Q9Y666 1083 aa21.17■□□□□ 0.98
RTN4R-202ENST00000416372 HHIPL2Q6UWX4 724 aa21.16■□□□□ 0.98
RTN4R-202ENST00000416372 MICU3Q86XE3 530 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 IQCA1Q86XH1 822 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 ZSCAN10Q96SZ4 725 aaPredicted RBP21.15■□□□□ 0.98
RTN4R-202ENST00000416372 ATP6V1DQ9Y5K8 247 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 TNKSO95271 1327 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 FLT1P17948 1338 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 PSDA5PKW4 1024 aaPredicted RBP21.15■□□□□ 0.98
RTN4R-202ENST00000416372 FOXD4L6Q3SYB3 417 aaPredicted RBP21.15■□□□□ 0.98
RTN4R-202ENST00000416372 DALRD3Q5D0E6 543 aaKnown RBP21.15■□□□□ 0.98
RTN4R-202ENST00000416372 FOXD4L3Q6VB84 417 aaPredicted RBP21.15■□□□□ 0.98
RTN4R-202ENST00000416372 KIAA0825Q8IV33 1275 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 CHAMP1Q96JM3 812 aa21.15■□□□□ 0.98
RTN4R-202ENST00000416372 ZNF646O15015 1829 aaPredicted RBP21.14■□□□□ 0.98
RTN4R-202ENST00000416372 ROBO3Q96MS0 1386 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 GOLGA8AA7E2F4 631 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 TRAK2O60296 914 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 CRKP46108 304 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 KLHL34Q8N239 644 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 LARGE2Q8N3Y3 721 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 ZNF277Q9NRM2 450 aaPredicted RBP21.14■□□□□ 0.97
RTN4R-202ENST00000416372 USP40Q9NVE5 1235 aa21.14■□□□□ 0.97
RTN4R-202ENST00000416372 H3BQV1 296 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 RXRAP19793 462 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 SEC23AQ15436 765 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 CDC37L1Q7L3B6 337 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 DYNLL2Q96FJ2 89 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 MYL10Q9BUA6 226 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 MRIQ9BWK5 157 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 FOCADQ5VW36 1801 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 MYH1P12882 1939 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 YDJCA8MPS7 323 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 PPFIA3O75145 1194 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 PLCD1P51178 756 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 DDX60LQ5H9U9 1706 aaKnown RBP21.13■□□□□ 0.97
RTN4R-202ENST00000416372 FAM47AQ5JRC9 791 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 CPLX2Q6PUV4 134 aaKnown RBP21.13■□□□□ 0.97
RTN4R-202ENST00000416372 CCDC144CPQ8IYA2 1237 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 SGIP1Q9BQI5 828 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 VPS33BQ9H267 617 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 MKNK2Q9HBH9 465 aa21.13■□□□□ 0.97
RTN4R-202ENST00000416372 TSPY2A6NKD2 308 aa21.12■□□□□ 0.97
RTN4R-202ENST00000416372 ADD1P35611 737 aaKnown RBP21.12■□□□□ 0.97
RTN4R-202ENST00000416372 NT5C2P49902 561 aa21.12■□□□□ 0.97
RTN4R-202ENST00000416372 HDLBPQ00341 1268 aaKnown RBP21.12■□□□□ 0.97
RTN4R-202ENST00000416372 SKOR2Q2VWA4 1001 aaPredicted RBP21.12■□□□□ 0.97
RTN4R-202ENST00000416372 ENAHQ8N8S7 591 aaPredicted RBP21.12■□□□□ 0.97
RTN4R-202ENST00000416372 ZDHHC15Q96MV8 337 aa21.12■□□□□ 0.97
RTN4R-202ENST00000416372 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
RTN4R-202ENST00000416372 CDKL5O76039 1030 aa21.11■□□□□ 0.97
RTN4R-202ENST00000416372 PICALMQ13492 652 aa21.11■□□□□ 0.97
RTN4R-202ENST00000416372 IFIT1BQ5T764 474 aaKnown RBP21.11■□□□□ 0.97
RTN4R-202ENST00000416372 APOBEC3HQ6NTF7 200 aaKnown RBP21.11■□□□□ 0.97
RTN4R-202ENST00000416372 CDC42EP5Q6NZY7 148 aa21.11■□□□□ 0.97
RTN4R-202ENST00000416372 ZNF287Q9HBT7 754 aa21.11■□□□□ 0.97
RTN4R-202ENST00000416372 ORC3Q9UBD5 711 aaPredicted RBP21.11■□□□□ 0.97
RTN4R-202ENST00000416372 CDC27P30260 824 aa21.1■□□□□ 0.97
RTN4R-202ENST00000416372 RBM5P52756 815 aaKnown RBP eCLIP21.1■□□□□ 0.97
RTN4R-202ENST00000416372 ZNF654Q8IZM8 581 aa21.1■□□□□ 0.97
RTN4R-202ENST00000416372 LMBRD1Q9NUN5 540 aa21.1■□□□□ 0.97
RTN4R-202ENST00000416372 PRPF40AO75400 957 aaKnown RBP21.1■□□□□ 0.97
RTN4R-202ENST00000416372 FDPSP14324 419 aaKnown RBP21.1■□□□□ 0.97
RTN4R-202ENST00000416372 FOSBP53539 338 aa21.1■□□□□ 0.97
RTN4R-202ENST00000416372 RCAN1P53805 252 aa21.1■□□□□ 0.97
RTN4R-202ENST00000416372 FERMT3Q86UX7 667 aa21.1■□□□□ 0.97
RTN4R-202ENST00000416372 NID2Q14112 1375 aa21.09■□□□□ 0.97
RTN4R-202ENST00000416372 PSME4Q14997 1843 aa21.09■□□□□ 0.97
RTN4R-202ENST00000416372 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
RTN4R-202ENST00000416372 WDHD1O75717 1129 aaPredicted RBP21.09■□□□□ 0.97
RTN4R-202ENST00000416372 TFAP4Q01664 338 aa21.09■□□□□ 0.97
RTN4R-202ENST00000416372 RTN1Q16799 776 aa21.09■□□□□ 0.97
RTN4R-202ENST00000416372 ZNF444Q8N0Y2 327 aaPredicted RBP21.09■□□□□ 0.97
RTN4R-202ENST00000416372 FAM217BQ9NTX9 383 aaPredicted RBP21.09■□□□□ 0.97
RTN4R-202ENST00000416372 SERPINA10Q9UK55 444 aa21.09■□□□□ 0.97
RTN4R-202ENST00000416372 C16orf86Q6ZW13 317 aa21.08■□□□□ 0.97
RTN4R-202ENST00000416372 CATIPQ7Z7H3 387 aa21.08■□□□□ 0.97
RTN4R-202ENST00000416372 SLC44A5Q8NCS7 719 aa21.08■□□□□ 0.97
RTN4R-202ENST00000416372 NUP133Q8WUM0 1156 aa21.08■□□□□ 0.97
RTN4R-202ENST00000416372 ECM29Q5VYK3 1845 aa21.08■□□□□ 0.97
RTN4R-202ENST00000416372 CCDC196A0A1B0GTZ2 297 aa21.08■□□□□ 0.96
RTN4R-202ENST00000416372 NMT2O60551 498 aa21.08■□□□□ 0.96
RTN4R-202ENST00000416372 RAD17O75943 681 aa21.08■□□□□ 0.96
RTN4R-202ENST00000416372 IARSP41252 1262 aaKnown RBP21.08■□□□□ 0.96
RTN4R-202ENST00000416372 PTGER2P43116 358 aa21.08■□□□□ 0.96
RTN4R-202ENST00000416372 CDK8P49336 464 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms