RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 MAP4K1Q92918 833 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 WNK4Q96J92 1243 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
CHRNA1-206ENST00000416004 RBM8AQ9Y5S9 174 aaKnown RBP11□□□□□ -0.65
CHRNA1-206ENST00000416004 MAST2Q6P0Q8 1798 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 ZNF532Q9HCE3 1301 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 PCNTO95613 3336 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 FOXP2O15409 715 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 ENTPD3O75355 529 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 CD2BP2O95400 341 aaKnown RBP11□□□□□ -0.65
CHRNA1-206ENST00000416004 MECOMQ03112 1051 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 NECTIN1Q15223 517 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
CHRNA1-206ENST00000416004 MAGEB6Q8N7X4 407 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 ZNF384Q8TF68 577 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
CHRNA1-206ENST00000416004 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 WRNIP1Q96S55 665 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 ZIC5Q96T25 663 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 ELP3Q9H9T3 547 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 DOCK2Q92608 1830 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 OTOFQ9HC10 1997 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 MAP3K12Q12852 859 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 UBE3CQ15386 1083 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 TMED8Q6PL24 325 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 OPTNQ96CV9 577 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 PKNOX2Q96KN3 472 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 TEPSINQ96N21 525 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 FZD1Q9UP38 647 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 GAKO14976 1311 aa10.99□□□□□ -0.65
CHRNA1-206ENST00000416004 MCCP23508 829 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 GTF2A2P52657 109 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 PICALMQ13492 652 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 IL17RAQ96F46 866 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 CLMNQ96JQ2 1002 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 TRIM34Q9BYJ4 488 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 GPR75-ASB3A0A0A6YYF3 556 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 GPAA1O43292 621 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 CAPN15O75808 1086 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 ANAPC15P60006 121 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 COL9A3Q14050 684 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 RABEP1Q15276 862 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 ERO1BQ86YB8 467 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 KCNB2Q92953 911 aa10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 NSUN4Q96CB9 384 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-206ENST00000416004 LAMB1P07942 1786 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 SLC27A2O14975 620 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 VGLL4Q14135 290 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 TEX11Q8IYF3 940 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 OTUD5Q96G74 571 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 PICK1Q9NRD5 415 aa10.97□□□□□ -0.65
CHRNA1-206ENST00000416004 TBC1D8O95759 1140 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 CETPP11597 493 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 DGKZQ13574 1117 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 ADCK5Q3MIX3 580 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 DSCC1Q9BVC3 393 aa10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 UPF3BQ9BZI7 483 aaKnown RBP10.96□□□□□ -0.65
CHRNA1-206ENST00000416004 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 MBD4O95243 580 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 CYP7A1P22680 504 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 PPATQ06203 517 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 NFIAQ12857 509 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 SNAPC2Q13487 334 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 POTEHQ6S545 545 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 LCORLQ8N3X6 602 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 SNX21Q969T3 373 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 STRBPQ96SI9 672 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 FAM198AQ9UFP1 575 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 MYH7P12883 1935 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 CCL15-CCL14A0A0B4J2E2 113 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 SPDYE5A6NIY4 337 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 FKTNO75072 461 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 CPA1P15085 419 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 PKN2Q16513 984 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 CCL15Q16663 113 aa10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 NOM1Q5C9Z4 860 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 ZKSCAN4Q969J2 545 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms