RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 BMP2KLQ5H9B9 411 aa20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 PLEKHM2Q8IWE5 1019 aa20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 EAF2Q96CJ1 260 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 BACH2Q9BYV9 841 aa20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 SMARCA5O60264 1052 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-204ENST00000414057 PPP4CP60510 307 aa20.45■□□□□ 0.86
SCAMP4-204ENST00000414057 TMED8Q6PL24 325 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-204ENST00000414057 CERS3Q8IU89 383 aa20.45■□□□□ 0.86
SCAMP4-204ENST00000414057 PARK7Q99497 189 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-204ENST00000414057 DHX36Q9H2U1 1008 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-204ENST00000414057 AATFQ9NY61 560 aaKnown RBP eCLIP20.45■□□□□ 0.865e-6■■□□□ 11.7
SCAMP4-204ENST00000414057 ZAP70P43403 619 aa20.44■□□□□ 0.86
SCAMP4-204ENST00000414057 LACTBP83111 547 aaPredicted RBP20.44■□□□□ 0.86
SCAMP4-204ENST00000414057 NBPF11Q86T75 865 aa20.44■□□□□ 0.86
SCAMP4-204ENST00000414057 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
SCAMP4-204ENST00000414057 HERC5Q9UII4 1024 aaKnown RBP20.44■□□□□ 0.86
SCAMP4-204ENST00000414057 DOCK2Q92608 1830 aa20.44■□□□□ 0.86
SCAMP4-204ENST00000414057 A0A0G2JLL6 359 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 PRMT2P55345 433 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 C17orf99Q6UX52 265 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 PRRT2Q7Z6L0 340 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 AACSQ86V21 672 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 CLASRPQ8N2M8 674 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 SH3RF3Q8TEJ3 882 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 TLR7Q9NYK1 1049 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 PI4KBQ9UBF8 816 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 AFG3L2Q9Y4W6 797 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 ARMC5Q96C12 935 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 SLC45A1Q9Y2W3 748 aa20.43■□□□□ 0.86
SCAMP4-204ENST00000414057 MOGSQ13724 837 aa20.42■□□□□ 0.86
SCAMP4-204ENST00000414057 C8orf34Q49A92 452 aa20.42■□□□□ 0.86
SCAMP4-204ENST00000414057 STAP2Q9UGK3 403 aa20.42■□□□□ 0.86
SCAMP4-204ENST00000414057 CPA4Q9UI42 421 aa20.42■□□□□ 0.86
SCAMP4-204ENST00000414057 IDH1O75874 414 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 MX1P20591 662 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 HOXD10P28358 340 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 PDE1AP54750 535 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 MAP3K12Q12852 859 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 TRIM34Q9BYJ4 488 aa20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 PIH1D3Q9NQM4 214 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-204ENST00000414057 CYP7A1P22680 504 aa20.4■□□□□ 0.86
SCAMP4-204ENST00000414057 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
SCAMP4-204ENST00000414057 GADL1Q6ZQY3 521 aa20.4■□□□□ 0.86
SCAMP4-204ENST00000414057 FOXP4Q8IVH2 680 aaPredicted RBP20.4■□□□□ 0.86
SCAMP4-204ENST00000414057 TGFBRAP1Q8WUH2 860 aa20.4■□□□□ 0.86
SCAMP4-204ENST00000414057 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
SCAMP4-204ENST00000414057 CAP2P40123 477 aa20.39■□□□□ 0.85
SCAMP4-204ENST00000414057 TTF1Q15361 905 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-204ENST00000414057 TMEM106CQ9BVX2 250 aa20.39■□□□□ 0.85
SCAMP4-204ENST00000414057 AS3MTQ9HBK9 375 aa20.39■□□□□ 0.85
SCAMP4-204ENST00000414057 PTCH2Q9Y6C5 1203 aa20.39■□□□□ 0.85
SCAMP4-204ENST00000414057 TTC41PQ6P2S7 1318 aa20.39■□□□□ 0.85
SCAMP4-204ENST00000414057 MAST2Q6P0Q8 1798 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 TRIM75PA6NK02 468 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 HLA-DOAP06340 250 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 SLURP2P0DP57 97 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 CAP1Q01518 475 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 ADGRA1Q86SQ6 560 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 MAPKAPK5Q8IW41 473 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 CRACR2BQ8N4Y2 399 aaPredicted RBP20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 ZNF280CQ8ND82 737 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 GPATCH3Q96I76 525 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 FLT1P17948 1338 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 ADGRA2Q96PE1 1338 aa20.38■□□□□ 0.85
SCAMP4-204ENST00000414057 FAM196BA6NMK8 535 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 USP17L5A8MUK1 530 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 FMNL1O95466 1100 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 PSMC4P43686 418 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 MAGEB6Q8N7X4 407 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 OTUD7AQ8TE49 926 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 SMCR8Q8TEV9 937 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 PNMA3Q9UL41 463 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 CYP2C8P10632 490 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 PABPC4Q13310 644 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 PROCA1Q8NCQ7 364 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 ZNF333Q96JL9 665 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 ARHGAP39Q9C0H5 1083 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 GINM1Q9NU53 330 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 AGTPBP1Q9UPW5 1226 aa20.37■□□□□ 0.85
SCAMP4-204ENST00000414057 ASNSP08243 561 aa20.36■□□□□ 0.85
SCAMP4-204ENST00000414057 BCRP11274 1271 aa20.36■□□□□ 0.85
SCAMP4-204ENST00000414057 USP5P45974 858 aa20.36■□□□□ 0.85
SCAMP4-204ENST00000414057 FCGRTP55899 365 aa20.36■□□□□ 0.85
SCAMP4-204ENST00000414057 SPP2Q13103 211 aa20.36■□□□□ 0.85
SCAMP4-204ENST00000414057 DOCK1Q14185 1865 aa20.35■□□□□ 0.85
SCAMP4-204ENST00000414057 ERC2O15083 957 aa20.35■□□□□ 0.85
SCAMP4-204ENST00000414057 METTL16Q86W50 562 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-204ENST00000414057 MIGA1Q8NAN2 632 aa20.35■□□□□ 0.85
SCAMP4-204ENST00000414057 SRRDQ9UH36 339 aa20.35■□□□□ 0.85
SCAMP4-204ENST00000414057 PALD1Q9ULE6 856 aa20.35■□□□□ 0.85
SCAMP4-204ENST00000414057 GSPT1P15170 499 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-204ENST00000414057 DYNLL1P63167 89 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms