RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 MIGA2Q7L4E1 593 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 ERC1Q8IUD2 1116 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 ANKRD13AQ8IZ07 590 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 R3HDMLQ9H3Y0 253 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 SAGE1Q9NXZ1 904 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 RAI14Q9P0K7 980 aa10.46□□□□□ -0.73
HERPUD2-203ENST00000413517 NAV1Q8NEY1 1877 aa10.46□□□□□ -0.74
HERPUD2-203ENST00000413517 BAZ2AQ9UIF9 1905 aaKnown RBP10.46□□□□□ -0.74
HERPUD2-203ENST00000413517 DDTLA6NHG4 134 aaPredicted RBP10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 IGF2BP3O00425 579 aaKnown RBP eCLIP10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 MAP3K13O43283 966 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 HMMRO75330 724 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 ZBTB48P10074 688 aaPredicted RBP10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 ZKSCAN4Q969J2 545 aaPredicted RBP10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 OPTNQ96CV9 577 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 KIF1BPQ96EK5 621 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 WRNIP1Q96S55 665 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 PCDHB15Q9Y5E8 787 aa10.45□□□□□ -0.74
HERPUD2-203ENST00000413517 SMARCA5O60264 1052 aaPredicted RBP10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 ENTPD3O75355 529 aa10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 PICALMQ13492 652 aa10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 HSP90AB4PQ58FF6 505 aa10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 SH3RF3Q8TEJ3 882 aaPredicted RBP10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 EDC3Q96F86 508 aaKnown RBP10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 PTPN18Q99952 460 aa10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 ZNF112Q9UJU3 913 aa10.44□□□□□ -0.74
HERPUD2-203ENST00000413517 COL2A1P02458 1487 aaPredicted RBP10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 MYH8P13535 1937 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 SPDYE5A6NIY4 337 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 IRF6O14896 467 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 TBC1D8O95759 1140 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 LDHCP07864 332 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 DYNLL1P63167 89 aaKnown RBP10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 NAA16Q6N069 864 aaPredicted RBP10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 SLF2Q8IX21 1173 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 BRI3BPQ8WY22 251 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 OTUD5Q96G74 571 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 ZNF341Q9BYN7 854 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 BCL11AQ9H165 835 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 AATFQ9NY61 560 aaKnown RBP eCLIP10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 HTTP42858 3142 aa10.43□□□□□ -0.74
HERPUD2-203ENST00000413517 MANSC4A6NHS7 340 aaPredicted RBP10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 PHF20L1A8MW92 1017 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 RAB11FIP3O75154 756 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 PPP4CP60510 307 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 GSTO1P78417 241 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 MAP3K10Q02779 954 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 SREBF2Q12772 1141 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 DCAF15Q66K64 600 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 TEX11Q8IYF3 940 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 CLASRPQ8N2M8 674 aaKnown RBP10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 DCTPP1Q9H773 170 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 EMILIN3Q9NT22 766 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 CSADQ9Y600 493 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 LOC285556D6RIA3 1793 aa10.42□□□□□ -0.74
HERPUD2-203ENST00000413517 DOCK3Q8IZD9 2030 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 CHGBP05060 677 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 CYP7A1P22680 504 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 CAP1Q01518 475 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 NOL9Q5SY16 702 aaKnown RBP10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 ZSCAN29Q8IWY8 852 aaPredicted RBP10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 MAGEB6Q8N7X4 407 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 CFHR5Q9BXR6 569 aa10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 OSBPL5Q9H0X9 879 aaPredicted RBP10.41□□□□□ -0.74
HERPUD2-203ENST00000413517 MGAMO43451 1857 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 FLT1P17948 1338 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 CCL15-CCL14A0A0B4J2E2 113 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 GPR25O00155 361 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 GOLIM4O00461 696 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 IFIT2P09913 472 aaKnown RBP10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 MOGSQ13724 837 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 CCL15Q16663 113 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 TSHZ3Q63HK5 1081 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 CCDC84Q86UT8 332 aaPredicted RBP10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 ERO1BQ86YB8 467 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 MAPKAPK5Q8IW41 473 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 MIGA1Q8NAN2 632 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 TGFBRAP1Q8WUH2 860 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 ZNF296Q8WUU4 475 aaPredicted RBP10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 HOOK2Q96ED9 719 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 LRRCC1Q9C099 1032 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 MCOLN1Q9GZU1 580 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 BOLA2Q9H3K6 86 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms