RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 L2HGDHQ9H9P8 463 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 GOLGA8FQ08AF8 430 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 GOLGA8DPQ0D2H9 430 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
TTC39A-208ENST00000413473 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 VSTM4Q8IW00 320 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 GTPBP4Q9BZE4 634 aaKnown RBP17.2■□□□□ 0.34
TTC39A-208ENST00000413473 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 LRP6O75581 1613 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 MIGA1Q8NAN2 632 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
TTC39A-208ENST00000413473 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
TTC39A-208ENST00000413473 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
TTC39A-208ENST00000413473 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 ERICH2A1L162 156 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 POLR2DO15514 142 aaKnown RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 PTPREP23469 700 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 NR5A1Q13285 461 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 FBXO38Q6PIJ6 1188 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 TMX1Q9H3N1 280 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 CHD4Q14839 1912 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 GNAT2P19087 354 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 RILPL1Q5EBL4 403 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 AK7Q96M32 723 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 FOXP1Q9H334 677 aaPredicted RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 HOOK1Q9UJC3 728 aaKnown RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 ZHX1Q9UKY1 873 aaPredicted RBP17.19■□□□□ 0.34
TTC39A-208ENST00000413473 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
TTC39A-208ENST00000413473 ETF1P62495 437 aaKnown RBP17.18■□□□□ 0.34
TTC39A-208ENST00000413473 POSTNQ15063 836 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 MAN1B1Q9UKM7 699 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 MORC2Q9Y6X9 1032 aaPredicted RBP17.18■□□□□ 0.34
TTC39A-208ENST00000413473 PNPLA7Q6ZV29 1317 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 DEXIO95424 95 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 TUBB4AP04350 444 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 ERCC6LQ2NKX8 1250 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 ELOA2Q8IYF1 753 aaPredicted RBP17.18■□□□□ 0.34
TTC39A-208ENST00000413473 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 LRRN4CLQ8ND94 238 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 INTS13Q9NVM9 706 aa17.18■□□□□ 0.34
TTC39A-208ENST00000413473 EXOC5O00471 708 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 MYO1BO43795 1136 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 IGSF3O75054 1194 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 PDILTQ8N807 584 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 DNAI1Q9UI46 699 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 NID2Q14112 1375 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 CCDC196A0A1B0GTZ2 297 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 CCP110O43303 1012 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
TTC39A-208ENST00000413473 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 TMTC2Q8N394 836 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 IQSEC3Q9UPP2 1182 aaPredicted RBP17.17■□□□□ 0.34
TTC39A-208ENST00000413473 SLIT2O94813 1529 aa17.17■□□□□ 0.34
TTC39A-208ENST00000413473 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
TTC39A-208ENST00000413473 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
TTC39A-208ENST00000413473 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 GRAMD1CQ8IYS0 662 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 CABP5Q9NP86 173 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.16■□□□□ 0.34
TTC39A-208ENST00000413473 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 TRIM65Q6PJ69 517 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 USP49Q70CQ1 688 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 NFE2L3Q9Y4A8 694 aa17.16■□□□□ 0.34
TTC39A-208ENST00000413473 CDK11BP21127 795 aaKnown RBP17.15■□□□□ 0.34
TTC39A-208ENST00000413473 IGHMBP2P38935 993 aaKnown RBP17.15■□□□□ 0.34
TTC39A-208ENST00000413473 PPARAQ07869 468 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 REXO1L1PQ8IX06 675 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 UBAC1Q9BSL1 405 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 RNF41Q9H4P4 317 aaPredicted RBP17.15■□□□□ 0.34
TTC39A-208ENST00000413473 SRPRBQ9Y5M8 271 aaKnown RBP17.15■□□□□ 0.34
TTC39A-208ENST00000413473 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
TTC39A-208ENST00000413473 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
TTC39A-208ENST00000413473 LRP5O75197 1615 aa17.14■□□□□ 0.34
TTC39A-208ENST00000413473 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 CYP7A1P22680 504 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 ADGRA1Q86SQ6 560 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 TMEM139Q8IV31 216 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
TTC39A-208ENST00000413473 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
TTC39A-208ENST00000413473 MLKLQ8NB16 471 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 A0A0G2JS52 829 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 MORC3Q14149 939 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms