RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 SLC5A6Q9Y289 635 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-205ENST00000411993 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
HDAC9-205ENST00000411993 STK11IPQ8N1F8 1099 aa8.36□□□□□ -1.07
HDAC9-205ENST00000411993 AGBL5Q8NDL9 886 aa8.36□□□□□ -1.07
HDAC9-205ENST00000411993 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
HDAC9-205ENST00000411993 COL17A1Q9UMD9 1497 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-205ENST00000411993 RLBP1P12271 317 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 ETF1P62495 437 aaKnown RBP8.35□□□□□ -1.07
HDAC9-205ENST00000411993 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-205ENST00000411993 BCL7CQ8WUZ0 217 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-205ENST00000411993 MISP3Q96FF7 219 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 MIR1-1HGQ9H1L0 117 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 VTI1BQ9UEU0 232 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 GTF2IRD1Q9UHL9 959 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 PCDHB5Q9Y5E4 795 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
HDAC9-205ENST00000411993 SORBS3O60504 671 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 CEACAM5P06731 702 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 TAL1P17542 331 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-205ENST00000411993 ITIH2P19823 946 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 ITGAEP38570 1179 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 ST13P50502 369 aaKnown RBP8.34□□□□□ -1.07
HDAC9-205ENST00000411993 IFI16Q16666 785 aaKnown RBP8.34□□□□□ -1.07
HDAC9-205ENST00000411993 NFXL1Q6ZNB6 911 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 ARMCX6Q7L4S7 300 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 CYFIP1Q7L576 1253 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 MKNK2Q9HBH9 465 aa8.34□□□□□ -1.07
HDAC9-205ENST00000411993 LRIG2O94898 1065 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 CDK8P49336 464 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 OXCT1P55809 520 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
HDAC9-205ENST00000411993 ZNF574Q6ZN55 896 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-205ENST00000411993 CRELD1Q96HD1 420 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-205ENST00000411993 ADGRE2Q9UHX3 823 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 U3KQE9 123 aa8.33□□□□□ -1.08
HDAC9-205ENST00000411993 TAGLNQ01995 201 aaKnown RBP8.32□□□□□ -1.08
HDAC9-205ENST00000411993 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
HDAC9-205ENST00000411993 FBRSQ9HAH7 460 aa8.32□□□□□ -1.08
HDAC9-205ENST00000411993 PAX4O43316 350 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 CTSHP09668 335 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-205ENST00000411993 GRK4P32298 578 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 BNIP3Q12983 259 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 PLCL1Q15111 1095 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 HRASLS5Q96KN8 279 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 FOXQ1Q9C009 403 aa8.31□□□□□ -1.08
HDAC9-205ENST00000411993 TMEM265A0A087WTH1 108 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 GNAT3A8MTJ3 354 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 PRKCQQ04759 706 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 HID1Q8IV36 788 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 JARID2Q92833 1246 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-205ENST00000411993 HEXIM2Q96MH2 286 aaKnown RBP8.3□□□□□ -1.08
HDAC9-205ENST00000411993 PRDM5Q9NQX1 630 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-205ENST00000411993 VAV3Q9UKW4 847 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 TLR6Q9Y2C9 796 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 USP31Q70CQ4 1352 aa8.3□□□□□ -1.08
HDAC9-205ENST00000411993 IGF2BP3O00425 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDAC9-205ENST00000411993 NKG7Q16617 165 aa8.29□□□□□ -1.08
HDAC9-205ENST00000411993 AOC3Q16853 763 aa8.29□□□□□ -1.08
HDAC9-205ENST00000411993 SPRED2Q7Z698 418 aa8.29□□□□□ -1.08
HDAC9-205ENST00000411993 MIPEPQ99797 713 aa8.29□□□□□ -1.08
HDAC9-205ENST00000411993 TPX2Q9ULW0 747 aaKnown RBP8.29□□□□□ -1.08
HDAC9-205ENST00000411993 PLAGL2Q9UPG8 496 aa8.29□□□□□ -1.08
HDAC9-205ENST00000411993 F6X3S4 739 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 SLITRK5O94991 958 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 EOMESO95936 686 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 SLBPQ14493 270 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC9-205ENST00000411993 FAM214BQ7L5A3 538 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 MFSD2AQ8NA29 543 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 BCL2L13Q9BXK5 485 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 TACC3Q9Y6A5 838 aa8.28□□□□□ -1.08
HDAC9-205ENST00000411993 GFRA2O00451 464 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 PGRP06401 933 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 CD8BP10966 210 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 CAP2P40123 477 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 PRAMEF13Q5VWM6 474 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 XAGE3Q8WTP9 111 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 MAPK8IP1Q9UQF2 711 aa8.27□□□□□ -1.09
HDAC9-205ENST00000411993 BPNT1O95861 308 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 CD96P40200 585 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 RPL6Q02878 288 aaKnown RBP8.26□□□□□ -1.09
HDAC9-205ENST00000411993 PDE4BQ07343 736 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 CBLL1Q75N03 491 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 GIPC2Q8TF65 315 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 TNKS2Q9H2K2 1166 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 SNX11Q9Y5W9 270 aa8.26□□□□□ -1.09
HDAC9-205ENST00000411993 ZBTB7CA1YPR0 619 aa8.25□□□□□ -1.09
HDAC9-205ENST00000411993 CST3P01034 146 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-205ENST00000411993 GBP2P32456 591 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-205ENST00000411993 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
HDAC9-205ENST00000411993 ZNF326Q5BKZ1 582 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms