RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 RGS3P49796 1198 aa13.28□□□□□ -0.28
CCDC148-203ENST00000409889 ZSCAN29Q8IWY8 852 aaPredicted RBP13.28□□□□□ -0.28
CCDC148-203ENST00000409889 SUCLG2Q96I99 432 aa13.28□□□□□ -0.28
CCDC148-203ENST00000409889 KIF16BQ96L93 1317 aa13.28□□□□□ -0.28
CCDC148-203ENST00000409889 PLA2G5P39877 138 aa13.27□□□□□ -0.29
CCDC148-203ENST00000409889 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
CCDC148-203ENST00000409889 LHX8Q68G74 356 aa13.27□□□□□ -0.29
CCDC148-203ENST00000409889 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
CCDC148-203ENST00000409889 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
CCDC148-203ENST00000409889 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
CCDC148-203ENST00000409889 RFX7Q2KHR2 1363 aa13.27□□□□□ -0.29
CCDC148-203ENST00000409889 ENTPD3O75355 529 aa13.26□□□□□ -0.29
CCDC148-203ENST00000409889 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
CCDC148-203ENST00000409889 ZKSCAN1P17029 563 aaPredicted RBP13.26□□□□□ -0.29
CCDC148-203ENST00000409889 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
CCDC148-203ENST00000409889 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
CCDC148-203ENST00000409889 PABPC4Q13310 644 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC148-203ENST00000409889 PUM3Q15397 648 aaKnown RBP13.26□□□□□ -0.29
CCDC148-203ENST00000409889 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
CCDC148-203ENST00000409889 SOCS4Q8WXH5 440 aa13.26□□□□□ -0.29
CCDC148-203ENST00000409889 IDI2Q9BXS1 227 aa13.26□□□□□ -0.29
CCDC148-203ENST00000409889 ASCC2Q9H1I8 757 aaPredicted RBP13.26□□□□□ -0.29
CCDC148-203ENST00000409889 PRKAG2Q9UGJ0 569 aa13.26□□□□□ -0.29
CCDC148-203ENST00000409889 BDP1A6H8Y1 2624 aa13.25□□□□□ -0.29
CCDC148-203ENST00000409889 DDTLA6NHG4 134 aaPredicted RBP13.25□□□□□ -0.29
CCDC148-203ENST00000409889 LDHBP07195 334 aaKnown RBP13.25□□□□□ -0.29
CCDC148-203ENST00000409889 XRCC5P13010 732 aaKnown RBP13.25□□□□□ -0.29
CCDC148-203ENST00000409889 HMGCS2P54868 508 aa13.25□□□□□ -0.29
CCDC148-203ENST00000409889 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
CCDC148-203ENST00000409889 SENP6Q9GZR1 1112 aaPredicted RBP13.25□□□□□ -0.29
CCDC148-203ENST00000409889 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
CCDC148-203ENST00000409889 MORF4L1Q9UBU8 362 aa13.25□□□□□ -0.29
CCDC148-203ENST00000409889 RLFQ13129 1914 aa13.25□□□□□ -0.29
CCDC148-203ENST00000409889 TMEM265A0A087WTH1 108 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 FGFR2P21802 821 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
CCDC148-203ENST00000409889 SPP2Q13103 211 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 PICALMQ13492 652 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 SHHQ15465 462 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 C9orf50Q5SZB4 431 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
CCDC148-203ENST00000409889 ZNF280CQ8ND82 737 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 KLHDC4Q8TBB5 520 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
CCDC148-203ENST00000409889 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
CCDC148-203ENST00000409889 NBPF7P0C2Y1 421 aaPredicted RBP13.23□□□□□ -0.29
CCDC148-203ENST00000409889 SLC5A1P13866 664 aa13.23□□□□□ -0.29
CCDC148-203ENST00000409889 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
CCDC148-203ENST00000409889 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
CCDC148-203ENST00000409889 CCL14Q16627 93 aa13.23□□□□□ -0.29
CCDC148-203ENST00000409889 RABL6Q3YEC7 729 aaPredicted RBP13.23□□□□□ -0.29
CCDC148-203ENST00000409889 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
CCDC148-203ENST00000409889 SRCIN1Q9C0H9 1055 aa13.23□□□□□ -0.29
CCDC148-203ENST00000409889 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
CCDC148-203ENST00000409889 PEX10O60683 326 aa13.22□□□□□ -0.29
CCDC148-203ENST00000409889 VAMP4O75379 141 aa13.22□□□□□ -0.29
CCDC148-203ENST00000409889 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
CCDC148-203ENST00000409889 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
CCDC148-203ENST00000409889 XIRP2A4UGR9 3374 aa13.22□□□□□ -0.29
CCDC148-203ENST00000409889 NCOR1O75376 2440 aa13.22□□□□□ -0.29
CCDC148-203ENST00000409889 GAKO14976 1311 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 IL16Q14005 1332 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 SALL1Q9NSC2 1324 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 RGS2P41220 211 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 RTP1P59025 263 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
CCDC148-203ENST00000409889 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 ANKRD44Q8N8A2 993 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 USP38Q8NB14 1042 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 LPIN2Q92539 896 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 USP6NLQ92738 828 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 APBA2Q99767 749 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
CCDC148-203ENST00000409889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC148-203ENST00000409889 TXNRD2Q9NNW7 524 aa13.21□□□□□ -0.29
CCDC148-203ENST00000409889 UTYO14607 1347 aa13.2□□□□□ -0.3
CCDC148-203ENST00000409889 MAPK4P31152 587 aa13.2□□□□□ -0.3
CCDC148-203ENST00000409889 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
CCDC148-203ENST00000409889 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
CCDC148-203ENST00000409889 PRDM5Q9NQX1 630 aaPredicted RBP13.2□□□□□ -0.3
CCDC148-203ENST00000409889 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
CCDC148-203ENST00000409889 DNM1LO00429 736 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 TBC1D12O60347 775 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 BTDP43251 543 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 HERVK_113P62684 666 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
CCDC148-203ENST00000409889 MORN1Q5T089 497 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 GPR142Q7Z601 462 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
CCDC148-203ENST00000409889 BADQ92934 168 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 PORCNQ9H237 461 aa13.19□□□□□ -0.3
CCDC148-203ENST00000409889 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
CCDC148-203ENST00000409889 SIPA1L1O43166 1804 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 ERVK-24P63145 666 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
CCDC148-203ENST00000409889 MTMR2Q13614 643 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms