RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ZC3H4Q9UPT8 1303 aaKnown RBP14.9□□□□□ -0.02
PMS1-204ENST00000409823 PCNTO95613 3336 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 POTEJP0CG39 1038 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 ANP32AP39687 249 aaKnown RBP14.9□□□□□ -0.02
PMS1-204ENST00000409823 RABEP1Q15276 862 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 STAG1Q8WVM7 1258 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 DEFB129Q9H1M3 183 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 RRAGCQ9HB90 399 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 MKNK2Q9HBH9 465 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 ZSWIM6Q9HCJ5 1215 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 GPHNQ9NQX3 736 aaPredicted RBP14.9□□□□□ -0.02
PMS1-204ENST00000409823 ANAPC4Q9UJX5 808 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 PSMA5P28066 241 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 SLC4A3P48751 1232 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 CYB5R4Q7L1T6 521 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 TTC6Q86TZ1 520 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
PMS1-204ENST00000409823 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 SERPINB13Q9UIV8 391 aa14.89□□□□□ -0.03
PMS1-204ENST00000409823 ENTPD3O75355 529 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
PMS1-204ENST00000409823 RPS6KB1P23443 525 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 MMP14P50281 582 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 FAM151AQ8WW52 585 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
PMS1-204ENST00000409823 FZD1Q9UP38 647 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 ECM29Q5VYK3 1845 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 NMT2O60551 498 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 CDK8P49336 464 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 PDE4BQ07343 736 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 DNAJC18Q9H819 358 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 PDRG1Q9NUG6 133 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 PI4KBQ9UBF8 816 aa14.88□□□□□ -0.03
PMS1-204ENST00000409823 ANTXR2P58335 489 aa14.87□□□□□ -0.03
PMS1-204ENST00000409823 FGD1P98174 961 aa14.87□□□□□ -0.03
PMS1-204ENST00000409823 SHROOM1Q2M3G4 852 aaPredicted RBP14.87□□□□□ -0.03
PMS1-204ENST00000409823 MB21D2Q8IYB1 491 aaPredicted RBP14.87□□□□□ -0.03
PMS1-204ENST00000409823 DHX36Q9H2U1 1008 aaKnown RBP14.87□□□□□ -0.03
PMS1-204ENST00000409823 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
PMS1-204ENST00000409823 NMRK2Q9NPI5 230 aa14.87□□□□□ -0.03
PMS1-204ENST00000409823 MYH1P12882 1939 aa14.87□□□□□ -0.03
PMS1-204ENST00000409823 PRC1O43663 620 aa14.87□□□□□ -0.03
PMS1-204ENST00000409823 DHX32Q7L7V1 743 aaKnown RBP14.87□□□□□ -0.03
PMS1-204ENST00000409823 TM6SF1Q9BZW5 370 aa14.87□□□□□ -0.03
PMS1-204ENST00000409823 IQCA1LA6NCM1 817 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 TNNI2P48788 182 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 AK2P54819 239 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 TNFAIP1Q13829 316 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 Q6ZUG5 572 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 C16orf86Q6ZW13 317 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 TRIM34Q9BYJ4 488 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
PMS1-204ENST00000409823 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 ADM5C9JUS6 153 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 DTNBO60941 627 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 MCM5P33992 734 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 NBPF12Q5TAG4 269 aaPredicted RBP14.86□□□□□ -0.03
PMS1-204ENST00000409823 FKBP1CQ5VVH2 108 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 FAM83AQ86UY5 434 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 KRT23Q9C075 422 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 CNNM2Q9H8M5 875 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 SENP2Q9HC62 589 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 FOCADQ5VW36 1801 aa14.86□□□□□ -0.03
PMS1-204ENST00000409823 ST18O60284 1047 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 NPM3O75607 178 aaKnown RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 TFAP4Q01664 338 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 GABPAQ06546 454 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 ZNF444Q8N0Y2 327 aaPredicted RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 ESR2Q92731 530 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 CHMP4CQ96CF2 233 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 TEPSINQ96N21 525 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 TTC14Q96N46 770 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 RASA1P20936 1047 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 EXOSC10Q01780 885 aaKnown RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 PRKG1Q13976 671 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 USP50Q70EL3 339 aaPredicted RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 SPRYD3Q8NCJ5 442 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 BRF1Q92994 677 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 HMGB1P09429 215 aaKnown RBP14.85□□□□□ -0.03
PMS1-204ENST00000409823 SHMT1P34896 483 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 RAB11FIP4Q86YS3 637 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 TBC1D2Q9BYX2 928 aa14.85□□□□□ -0.03
PMS1-204ENST00000409823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.03
PMS1-204ENST00000409823 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 ROBO3Q96MS0 1386 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 GDF11O95390 407 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 FGRP09769 529 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 TSPY3P0CV98 308 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms