RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 IFNAR1P17181 557 aa17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 TOB1P50616 345 aaPredicted RBP17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 MDM2Q00987 491 aaPredicted RBP17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 GRIN1Q05586 938 aa17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 ERCC6LQ2NKX8 1250 aa17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
LYSMD4-204ENST00000409796 SLFN14P0C7P3 912 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 ETF1P62495 437 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 GABPB1Q06547 395 aaPredicted RBP17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 RASGRF1Q13972 1273 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 AKNAD1Q5T1N1 836 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 PRKAB2O43741 272 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 MMP1P03956 469 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 TUBB4AP04350 444 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
LYSMD4-204ENST00000409796 LRP5O75197 1615 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 CCP110O43303 1012 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 HSP90AA4PQ58FG1 418 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 WASF1Q92558 559 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 CNNM2Q9H8M5 875 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 MROH5Q6ZUA9 1318 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 TRIM65Q6PJ69 517 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 MFSD6Q6ZSS7 791 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 KRT23Q9C075 422 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 MAN1B1Q9UKM7 699 aa17.41■□□□□ 0.38
LYSMD4-204ENST00000409796 MYO1BO43795 1136 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 PRR29P0C7W0 189 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 SLC5A1P13866 664 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 REXO1L1PQ8IX06 675 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 KRT222Q8N1A0 295 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 TOMM22Q9NS69 142 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 FAM53CQ9NYF3 392 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 NID2Q14112 1375 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 RTN1Q16799 776 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 SERTAD1Q9UHV2 236 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 PHLPP2Q6ZVD8 1323 aa17.4■□□□□ 0.38
LYSMD4-204ENST00000409796 H2AFXP16104 143 aaPredicted RBP17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 PTPREP23469 700 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 POSTNQ15063 836 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 TMEM139Q8IV31 216 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 ELOA2Q8IYF1 753 aaPredicted RBP17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 CMTR1Q8N1G2 835 aaKnown RBP17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 LCORLQ8N3X6 602 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 SLIT2O94813 1529 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 MYH6P13533 1939 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 FANCGO15287 622 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 POLR2DO15514 142 aaKnown RBP17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 WTAPQ15007 396 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 TRIM22Q8IYM9 498 aa17.39■□□□□ 0.37
LYSMD4-204ENST00000409796 VGLL3A8MV65 326 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 TDO2P48775 406 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 NR5A1Q13285 461 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 STAG1Q8WVM7 1258 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 SLC4A4Q9Y6R1 1079 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 GRAMD1CQ8IYS0 662 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 FOXP1Q9H334 677 aaPredicted RBP17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 SLAIN2Q9P270 581 aa17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 HOOK1Q9UJC3 728 aaKnown RBP17.38■□□□□ 0.37
LYSMD4-204ENST00000409796 TBX2Q13207 712 aaPredicted RBP17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 CRACR2BQ8N4Y2 399 aaPredicted RBP17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 BCL9O00512 1426 aa17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 NFE2L3Q9Y4A8 694 aa17.37■□□□□ 0.37
LYSMD4-204ENST00000409796 DEXIO95424 95 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 ATP2B1P20020 1258 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 SARSP49591 514 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 FCHSD1Q86WN1 690 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 ARHGAP6O43182 974 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 ZNF18P17022 549 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 MORC3Q14149 939 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 ARHGAP29Q52LW3 1261 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms