RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 SKAP1Q86WV1 359 aa17.73■□□□□ 0.43
SUMO1-207ENST00000409498 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
SUMO1-207ENST00000409498 SLC10A3P09131 477 aa17.72■□□□□ 0.43
SUMO1-207ENST00000409498 GABPAQ06546 454 aa17.72■□□□□ 0.43
SUMO1-207ENST00000409498 DNAJC18Q9H819 358 aa17.72■□□□□ 0.43
SUMO1-207ENST00000409498 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
SUMO1-207ENST00000409498 BAZ2AQ9UIF9 1905 aaKnown RBP17.71■□□□□ 0.43
SUMO1-207ENST00000409498 FOXP2O15409 715 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 VEGFBP49765 207 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 PLCD1P51178 756 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 ZNF157P51786 506 aaPredicted RBP17.71■□□□□ 0.43
SUMO1-207ENST00000409498 C12orf60Q5U649 245 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 TATDN1Q6P1N9 297 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 CTR9Q6PD62 1173 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 RASAL3Q86YV0 1011 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 IFNL3Q8IZI9 196 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 CAPNS2Q96L46 248 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 WRNIP1Q96S55 665 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.71■□□□□ 0.43
SUMO1-207ENST00000409498 EPB41L4AQ9HCS5 686 aaPredicted RBP17.71■□□□□ 0.43
SUMO1-207ENST00000409498 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 ARPP21Q9UBL0 812 aaPredicted RBP17.71■□□□□ 0.43
SUMO1-207ENST00000409498 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
SUMO1-207ENST00000409498 SERPINB13Q9UIV8 391 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 THSD7BQ9C0I4 1608 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 LAMB1P07942 1786 aa17.71■□□□□ 0.43
SUMO1-207ENST00000409498 WDR33Q9C0J8 1336 aaKnown RBP17.71■□□□□ 0.42
SUMO1-207ENST00000409498 CTNND1O60716 968 aaKnown RBP17.7■□□□□ 0.42
SUMO1-207ENST00000409498 POLR3DP05423 398 aaPredicted RBP17.7■□□□□ 0.42
SUMO1-207ENST00000409498 CHMLP26374 656 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
SUMO1-207ENST00000409498 VGLL4Q14135 290 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 ALX1Q15699 326 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 CYP4F22Q6NT55 531 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 CCDC129Q6ZRS4 1044 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 CCDC171Q6TFL3 1326 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 RAD50Q92878 1312 aa17.7■□□□□ 0.42
SUMO1-207ENST00000409498 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 USP17L21D6R901 530 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 SLURP2P0DP57 97 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 INPP5BP32019 993 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 MAP2K2P36507 400 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
SUMO1-207ENST00000409498 ZNF589Q86UQ0 364 aaPredicted RBP17.69■□□□□ 0.42
SUMO1-207ENST00000409498 JMYQ8N9B5 988 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 SLC10A4Q96EP9 437 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 CLMNQ96JQ2 1002 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 NACAP1Q9BZK3 213 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 GINM1Q9NU53 330 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 CSADQ9Y600 493 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
SUMO1-207ENST00000409498 SPDYE5A6NIY4 337 aa17.68■□□□□ 0.42
SUMO1-207ENST00000409498 ZBTB48P10074 688 aaPredicted RBP17.68■□□□□ 0.42
SUMO1-207ENST00000409498 HSPD1P10809 573 aaKnown RBP17.68■□□□□ 0.42
SUMO1-207ENST00000409498 NOGQ13253 232 aa17.68■□□□□ 0.42
SUMO1-207ENST00000409498 AMOTL1Q8IY63 956 aa17.68■□□□□ 0.42
SUMO1-207ENST00000409498 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
SUMO1-207ENST00000409498 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
SUMO1-207ENST00000409498 SWAP70Q9UH65 585 aa17.68■□□□□ 0.42
SUMO1-207ENST00000409498 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 FAM196BA6NMK8 535 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 CYP2D6P10635 497 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 CAP2P40123 477 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 RRP1BQ14684 758 aaKnown RBP17.67■□□□□ 0.42
SUMO1-207ENST00000409498 VPS53Q5VIR6 699 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 SPRYD7Q5W111 196 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 ERO1BQ86YB8 467 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
SUMO1-207ENST00000409498 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
SUMO1-207ENST00000409498 RUFY2Q8WXA3 655 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 WNK4Q96J92 1243 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 DOCK1Q14185 1865 aa17.67■□□□□ 0.42
SUMO1-207ENST00000409498 APPP05067 770 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 SHMT1P34896 483 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 EVX2Q03828 476 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 PPATQ06203 517 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 C16orf86Q6ZW13 317 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 IL25Q9H293 177 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 ELP3Q9H9T3 547 aa17.66■□□□□ 0.42
SUMO1-207ENST00000409498 SGSM2O43147 1006 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 GJA5P36382 358 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 TDO2P48775 406 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 OPTNQ96CV9 577 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 DSCC1Q9BVC3 393 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 TBC1D2Q9BYX2 928 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 NAPBQ9H115 298 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 ANAPC4Q9UJX5 808 aa17.65■□□□□ 0.42
SUMO1-207ENST00000409498 ATAD5Q96QE3 1844 aa17.64■□□□□ 0.41
SUMO1-207ENST00000409498 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
SUMO1-207ENST00000409498 FGAP02671 866 aa17.64■□□□□ 0.41
SUMO1-207ENST00000409498 PTPRAP18433 802 aa17.64■□□□□ 0.41
SUMO1-207ENST00000409498 PPIL2Q13356 520 aa17.64■□□□□ 0.41
SUMO1-207ENST00000409498 SLC4A8Q2Y0W8 1093 aa17.64■□□□□ 0.41
SUMO1-207ENST00000409498 PAXIP1Q6ZW49 1069 aaPredicted RBP17.64■□□□□ 0.41
SUMO1-207ENST00000409498 PHIPQ8WWQ0 1821 aa17.63■□□□□ 0.41
SUMO1-207ENST00000409498 TESPA1A2RU30 521 aaPredicted RBP17.63■□□□□ 0.41
SUMO1-207ENST00000409498 SMIM22K7EJ46 135 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms