RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PCDHGB7Q9Y5F8 929 aa7.04□□□□□ -1.28
CLK1-202ENST00000409403 TMEM131LA2VDJ0 1609 aa7.04□□□□□ -1.28
CLK1-202ENST00000409403 TCERG1O14776 1098 aaKnown RBP7.03□□□□□ -1.28
CLK1-202ENST00000409403 FBXO24O75426 580 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 PTPRAP18433 802 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 ALAS2P22557 587 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 INSM1Q01101 510 aaPredicted RBP7.03□□□□□ -1.28
CLK1-202ENST00000409403 RPS26P11Q5JNZ5 115 aaPredicted RBP7.03□□□□□ -1.28
CLK1-202ENST00000409403 PSAPL1Q6NUJ1 521 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 TPTE2Q6XPS3 522 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 SV2BQ7L1I2 683 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 ERBB4Q15303 1308 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 NCOA3Q9Y6Q9 1424 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 PRXQ9BXM0 1461 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 FAM83GA6ND36 823 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 IRX6P78412 446 aaPredicted RBP7.03□□□□□ -1.28
CLK1-202ENST00000409403 SRSF11Q05519 484 aaKnown RBP7.03□□□□□ -1.28
CLK1-202ENST00000409403 PWP1Q13610 501 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 IRF7Q92985 503 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 CAMKK2Q96RR4 588 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 RSRP1Q9BUV0 290 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 ACBD3Q9H3P7 528 aa7.03□□□□□ -1.28
CLK1-202ENST00000409403 SRA1Q9HD15 236 aaKnown RBP7.03□□□□□ -1.28
CLK1-202ENST00000409403 MYO5BQ9ULV0 1848 aa7.02□□□□□ -1.28
CLK1-202ENST00000409403 FMN1Q68DA7 1419 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 SLIT2O94813 1529 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 EFCAB6Q5THR3 1501 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 IGSF3O75054 1194 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 RLBP1P12271 317 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 HNRNPMP52272 730 aaKnown RBP eCLIP7.02□□□□□ -1.291e-7■■■■□ 21.9
CLK1-202ENST00000409403 RACK1P63244 317 aaKnown RBP7.02□□□□□ -1.29
CLK1-202ENST00000409403 MAP3K10Q02779 954 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 TTC9Q92623 222 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 CLEC4MQ9H2X3 399 aaPredicted RBP7.02□□□□□ -1.29
CLK1-202ENST00000409403 COPRSQ9NQ92 184 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 KBTBD4Q9NVX7 518 aa7.02□□□□□ -1.29
CLK1-202ENST00000409403 ADGRB3O60242 1522 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 CROCC2H7BZ55 1655 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 FAM177BA6PVY3 158 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 KIF3BO15066 747 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 RGS9O75916 674 aaPredicted RBP7.01□□□□□ -1.29
CLK1-202ENST00000409403 EPXP11678 715 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 SREK1Q8WXA9 508 aaKnown RBP7.01□□□□□ -1.29
CLK1-202ENST00000409403 NECAB3Q96P71 396 aaPredicted RBP7.01□□□□□ -1.29
CLK1-202ENST00000409403 TINF2Q9BSI4 451 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 SYT17Q9BSW7 474 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 ADAM19Q9H013 955 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 CAPN10Q9HC96 672 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 SEC31BQ9NQW1 1179 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 STK17AQ9UEE5 414 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 GPN3Q9UHW5 284 aaPredicted RBP7.01□□□□□ -1.29
CLK1-202ENST00000409403 SOX13Q9UN79 622 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 TRIM33Q9UPN9 1127 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 RAB3GAP2Q9H2M9 1393 aa7.01□□□□□ -1.29
CLK1-202ENST00000409403 ENC1O14682 589 aa7□□□□□ -1.29
CLK1-202ENST00000409403 GMPRP36959 345 aa7□□□□□ -1.29
CLK1-202ENST00000409403 KRT76Q01546 638 aa7□□□□□ -1.29
CLK1-202ENST00000409403 FAAP100Q0VG06 881 aa7□□□□□ -1.29
CLK1-202ENST00000409403 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
CLK1-202ENST00000409403 HSP90AA2PQ14568 343 aaPredicted RBP7□□□□□ -1.29
CLK1-202ENST00000409403 ADAMTSL4Q6UY14 1074 aa7□□□□□ -1.29
CLK1-202ENST00000409403 RELL1Q8IUW5 271 aa7□□□□□ -1.29
CLK1-202ENST00000409403 CACTIN-AS1Q8N1I8 211 aa7□□□□□ -1.29
CLK1-202ENST00000409403 TRIM56Q9BRZ2 755 aaKnown RBP7□□□□□ -1.29
CLK1-202ENST00000409403 C19orf44Q9H6X5 657 aa7□□□□□ -1.29
CLK1-202ENST00000409403 SMG6Q86US8 1419 aaKnown RBP7□□□□□ -1.29
CLK1-202ENST00000409403 HSP90AA1P07900 732 aaKnown RBP7□□□□□ -1.29
CLK1-202ENST00000409403 CELA3AP09093 270 aa7□□□□□ -1.29
CLK1-202ENST00000409403 TNNI2P48788 182 aa7□□□□□ -1.29
CLK1-202ENST00000409403 PCDH1Q08174 1060 aa7□□□□□ -1.29
CLK1-202ENST00000409403 GDF6Q6KF10 455 aaPredicted RBP7□□□□□ -1.29
CLK1-202ENST00000409403 VN1R5Q7Z5H4 357 aa7□□□□□ -1.29
CLK1-202ENST00000409403 NUDT8Q8WV74 236 aa7□□□□□ -1.29
CLK1-202ENST00000409403 ACDQ96AP0 544 aa7□□□□□ -1.29
CLK1-202ENST00000409403 INPP5FQ9Y2H2 1132 aa7□□□□□ -1.29
CLK1-202ENST00000409403 DCCP43146 1447 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 PTPN23Q9H3S7 1636 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 NWD2Q9ULI1 1742 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 CDC27P30260 824 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 GBP2P32456 591 aaPredicted RBP6.99□□□□□ -1.29
CLK1-202ENST00000409403 PPP2R3AQ06190 1150 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 SF3A1Q15459 793 aaKnown RBP6.99□□□□□ -1.29
CLK1-202ENST00000409403 MAP3K11Q16584 847 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 L1TD1Q5T7N2 865 aaKnown RBP6.99□□□□□ -1.29
CLK1-202ENST00000409403 KANK3Q6NY19 840 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 DHX29Q7Z478 1369 aaKnown RBP6.99□□□□□ -1.29
CLK1-202ENST00000409403 USP32Q8NFA0 1604 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 TMEM74Q96NL1 305 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 JPH1Q9HDC5 661 aaPredicted RBP6.99□□□□□ -1.29
CLK1-202ENST00000409403 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 STARD13Q9Y3M8 1113 aa6.99□□□□□ -1.29
CLK1-202ENST00000409403 TRPM2O94759 1503 aa6.98□□□□□ -1.29
CLK1-202ENST00000409403 RNF123Q5XPI4 1314 aa6.98□□□□□ -1.29
CLK1-202ENST00000409403 B3GALT4O96024 378 aa6.98□□□□□ -1.29
CLK1-202ENST00000409403 LIG3P49916 1009 aa6.98□□□□□ -1.29
CLK1-202ENST00000409403 CABP4P57796 275 aa6.98□□□□□ -1.29
CLK1-202ENST00000409403 UNC5CLQ8IV45 518 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms