RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 IL25Q9H293 177 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 ERLIN2O94905 339 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 EIF2S2P20042 333 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 PDIA6Q15084 440 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 HSP90B2PQ58FF3 399 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 CCDC30Q5VVM6 783 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 CCDC73Q6ZRK6 1079 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 CNPY4Q8N129 248 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 SSH3Q8TE77 659 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 BSDC1Q9NW68 430 aaPredicted RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 SBF1O95248 1867 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 A0A1W2PQ27 194 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 A0A1W2PQ64 194 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 A0A1W2PQD8 194 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 VWA3AA6NCI4 1184 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 HNRNPH1P31943 449 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 TMC6Q7Z403 805 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 KIFC2Q96AC6 838 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 XPO4Q9C0E2 1151 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 PDE11AQ9HCR9 933 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 PIM2Q9P1W9 311 aa12.16□□□□□ -0.46
NIF3L1-204ENST00000409357 APBB1O00213 710 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 HIP1O00291 1037 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 FANCGO15287 622 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 STX10O60499 249 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 NUBP1P53384 320 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 AOPEPQ8N6M6 819 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 JAKMIP1Q96N16 626 aaKnown RBP12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
NIF3L1-204ENST00000409357 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 ADD1P35611 737 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 DALRD3Q5D0E6 543 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 PRPF38AQ8NAV1 312 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 GNL3LQ9NVN8 582 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 BABAM1Q9NWV8 329 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 NIP7Q9Y221 180 aaKnown RBP eCLIP12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
NIF3L1-204ENST00000409357 GLRX3O76003 335 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 MCM3P25205 808 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 E2F4Q16254 413 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 CNNM3Q8NE01 707 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 IFNKQ9P0W0 207 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 HMG20BQ9P0W2 317 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 CCDC88AQ3V6T2 1871 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 MAP3K15Q6ZN16 1313 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 UBN2Q6ZU65 1347 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ARFGEF2Q9Y6D5 1785 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 CUTAO60888 179 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 NEDD9Q14511 834 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 NCAPHQ15003 741 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 FOXR1Q6PIV2 292 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 NBPF5PQ86XG9 351 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 DHX37Q8IY37 1157 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 AMOTL1Q8IY63 956 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ZNF526Q8TF50 670 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 MAP4K1Q92918 833 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ANKZF1Q9H8Y5 726 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
NIF3L1-204ENST00000409357 PRPF6O94906 941 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 GPTP24298 496 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 PRELPP51888 382 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 MNAT1P51948 309 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 NLRP12P59046 1061 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 CHMP4BP1P59074 171 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 IRX1P78414 480 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms