RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 TRIM32Q13049 653 aa16.27■□□□□ 0.2
TUBA3D-202ENST00000409047 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
TUBA3D-202ENST00000409047 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
TUBA3D-202ENST00000409047 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.27■□□□□ 0.2
TUBA3D-202ENST00000409047 ABCF2Q9UG63 623 aa16.27■□□□□ 0.2
TUBA3D-202ENST00000409047 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.19
TUBA3D-202ENST00000409047 SPP2Q13103 211 aa16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 PI16Q6UXB8 463 aa16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 COA7Q96BR5 231 aa16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 MEIS3Q99687 375 aa16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
TUBA3D-202ENST00000409047 A0A1B0GUL7 405 aa16.25■□□□□ 0.19
TUBA3D-202ENST00000409047 BMP8BP34820 402 aa16.25■□□□□ 0.19
TUBA3D-202ENST00000409047 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
TUBA3D-202ENST00000409047 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
TUBA3D-202ENST00000409047 DLL1O00548 723 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 HMGCRP04035 888 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 HMGCS2P54868 508 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 JAG1P78504 1218 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 SH3D19Q5HYK7 790 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 NECAB2Q7Z6G3 386 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 ANKLE1Q8NAG6 615 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 ZNF280CQ8ND82 737 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 NSUN4Q96CB9 384 aaKnown RBP16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 ASCC2Q9H1I8 757 aaPredicted RBP16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 HMG20BQ9P0W2 317 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 CUL9Q8IWT3 2517 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
TUBA3D-202ENST00000409047 PEX10O60683 326 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 CAP2P40123 477 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 TFCP2Q12800 502 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 TRIB2Q92519 343 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 MORF4L1Q9UBU8 362 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 FOCADQ5VW36 1801 aa16.23■□□□□ 0.19
TUBA3D-202ENST00000409047 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 MTX1Q13505 466 aa16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 POTEEQ6S8J3 1075 aa16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 C7orf61Q8IZ16 206 aa16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 OGDHLQ9ULD0 1010 aa16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
TUBA3D-202ENST00000409047 PFASO15067 1338 aa16.21■□□□□ 0.19
TUBA3D-202ENST00000409047 SHROOM1Q2M3G4 852 aaPredicted RBP16.21■□□□□ 0.19
TUBA3D-202ENST00000409047 DNAJC18Q9H819 358 aa16.21■□□□□ 0.19
TUBA3D-202ENST00000409047 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
TUBA3D-202ENST00000409047 USP17L5A8MUK1 530 aa16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 ARID4AP29374 1257 aaPredicted RBP16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 TBC1D2Q9BYX2 928 aa16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
TUBA3D-202ENST00000409047 FRMPD3Q5JV73 1810 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 VCANP13611 3396 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 SYN1P17600 705 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 MCAMP43121 646 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 MAGEA10P43363 369 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 LRIT3Q3SXY7 679 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 Q7L0L9 218 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 SH3RF3Q8TEJ3 882 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 USP6NLQ92738 828 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 WDR18Q9BV38 432 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 HMX1Q9NP08 348 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
TUBA3D-202ENST00000409047 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 SRGAP3O43295 1099 aa16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 COL6A1P12109 1028 aa16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 MTMR2Q13614 643 aa16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 P2RX7Q99572 595 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-202ENST00000409047 PRUNE2Q8WUY3 3088 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 LDHCP07864 332 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 CYP2B6P20813 491 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 BACE1P56817 501 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 PABPC4Q13310 644 aaKnown RBP eCLIP16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 Q3C1V9 767 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 ADGRA1Q86SQ6 560 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 RBPJLQ9UBG7 517 aa16.17■□□□□ 0.18
TUBA3D-202ENST00000409047 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 XRCC5P13010 732 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms