RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 BCL11AQ9H165 835 aa23.55■■□□□ 1.36
SMARCB1-204ENST00000407422 PLCG2P16885 1265 aa23.54■■□□□ 1.36
SMARCB1-204ENST00000407422 CYP7A1P22680 504 aa23.54■■□□□ 1.36
SMARCB1-204ENST00000407422 DYNLL1P63167 89 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-204ENST00000407422 RRP1BQ14684 758 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-204ENST00000407422 KIF1BPQ96EK5 621 aa23.54■■□□□ 1.36
SMARCB1-204ENST00000407422 CPA4Q9UI42 421 aa23.54■■□□□ 1.36
SMARCB1-204ENST00000407422 FLT1P17948 1338 aa23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 A0A0G2JLL6 359 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 ECM2O94769 699 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 PDE3AQ14432 1141 aa23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 C17orf99Q6UX52 265 aa23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 PRRT2Q7Z6L0 340 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 PDE4DIPQ5VU43 2346 aa23.53■■□□□ 1.36
SMARCB1-204ENST00000407422 TRIM75PA6NK02 468 aa23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 IGSF3O75054 1194 aa23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 LACTBP83111 547 aaPredicted RBP23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 CLASRPQ8N2M8 674 aaKnown RBP23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 MAGEB6Q8N7X4 407 aa23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 MIGA1Q8NAN2 632 aa23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 KIAA0100Q14667 2235 aaKnown RBP23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 ADGRA2Q96PE1 1338 aa23.52■■□□□ 1.36
SMARCB1-204ENST00000407422 CHMP4BQ9H444 224 aaKnown RBP23.51■■□□□ 1.35
SMARCB1-204ENST00000407422 PI4KBQ9UBF8 816 aa23.51■■□□□ 1.35
SMARCB1-204ENST00000407422 CYP2C8P10632 490 aa23.51■■□□□ 1.35
SMARCB1-204ENST00000407422 GADL1Q6ZQY3 521 aa23.51■■□□□ 1.35
SMARCB1-204ENST00000407422 DHX36Q9H2U1 1008 aaKnown RBP23.51■■□□□ 1.35
SMARCB1-204ENST00000407422 PALD1Q9ULE6 856 aa23.51■■□□□ 1.35
SMARCB1-204ENST00000407422 MYH1P12882 1939 aa23.5■■□□□ 1.35
SMARCB1-204ENST00000407422 ARHGEF6Q15052 776 aa23.5■■□□□ 1.35
SMARCB1-204ENST00000407422 FASTKD5Q7L8L6 764 aaKnown RBP23.5■■□□□ 1.35
SMARCB1-204ENST00000407422 SAP30BPQ9UHR5 308 aaKnown RBP23.5■■□□□ 1.35
SMARCB1-204ENST00000407422 HERC5Q9UII4 1024 aaKnown RBP23.5■■□□□ 1.35
SMARCB1-204ENST00000407422 RAB11FIP3O75154 756 aa23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 IFIT2P09913 472 aaKnown RBP23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 CTGFP29279 349 aa23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 CAP2P40123 477 aa23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 MAP3K12Q12852 859 aa23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 DNAJC18Q9H819 358 aa23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 PTCH2Q9Y6C5 1203 aa23.49■■□□□ 1.35
SMARCB1-204ENST00000407422 KIF22Q14807 665 aa23.48■■□□□ 1.35
SMARCB1-204ENST00000407422 SLC4A8Q2Y0W8 1093 aa23.48■■□□□ 1.35
SMARCB1-204ENST00000407422 PARK7Q99497 189 aaKnown RBP23.48■■□□□ 1.35
SMARCB1-204ENST00000407422 ARMC5Q96C12 935 aa23.48■■□□□ 1.35
SMARCB1-204ENST00000407422 SPP2Q13103 211 aa23.47■■□□□ 1.35
SMARCB1-204ENST00000407422 JAG1P78504 1218 aa23.46■■□□□ 1.35
SMARCB1-204ENST00000407422 METTL16Q86W50 562 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-204ENST00000407422 TRIM47Q96LD4 638 aa23.46■■□□□ 1.35
SMARCB1-204ENST00000407422 DNAJC2Q99543 621 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-204ENST00000407422 POTEFA5A3E0 1075 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 GOLIM4O00461 696 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 BCRP11274 1271 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 PSMC4P43686 418 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 SHROOM1Q2M3G4 852 aaPredicted RBP23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 TREML2Q5T2D2 321 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 FOXP4Q8IVH2 680 aaPredicted RBP23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 ZNF280CQ8ND82 737 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 EDC3Q96F86 508 aaKnown RBP23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 MGAMO43451 1857 aa23.45■■□□□ 1.34
SMARCB1-204ENST00000407422 TTF1Q15361 905 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 CRACR2BQ8N4Y2 399 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 SLC45A1Q9Y2W3 748 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 LOC285556D6RIA3 1793 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 USP17L5A8MUK1 530 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 PDE6AP16499 860 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 USP5P45974 858 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 SLC9C1Q4G0N8 1177 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 SLC9C2Q5TAH2 1124 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 RIOK1Q9BRS2 568 aaKnown RBP23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 AGTPBP1Q9UPW5 1226 aa23.44■■□□□ 1.34
SMARCB1-204ENST00000407422 RBBP6Q7Z6E9 1792 aaKnown RBP23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 GNRH1P01148 92 aa23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 HMGCS2P54868 508 aa23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 CERS3Q8IU89 383 aa23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 ZNF333Q96JL9 665 aa23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 TRIM34Q9BYJ4 488 aa23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 BOLA2Q9H3K6 86 aa23.43■■□□□ 1.34
SMARCB1-204ENST00000407422 SMARCA5O60264 1052 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-204ENST00000407422 GDF11O95390 407 aa23.42■■□□□ 1.34
SMARCB1-204ENST00000407422 FMNL1O95466 1100 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-204ENST00000407422 HLA-DOAP06340 250 aa23.42■■□□□ 1.34
SMARCB1-204ENST00000407422 TMED8Q6PL24 325 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-204ENST00000407422 OSBPP22059 807 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 PROCA1Q8NCQ7 364 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 SH3TC2Q8TF17 1288 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 TBC1D2Q9BYX2 928 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 LRRCC1Q9C099 1032 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 SRRDQ9UH36 339 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 ZNF532Q9HCE3 1301 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 MAGEB6P1A0A0J9YX57 407 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 ASNSP08243 561 aa23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 SMCR8Q8TEV9 937 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-204ENST00000407422 TCRBV5S4A2TA0A5A2 114 aa23.4■■□□□ 1.34
SMARCB1-204ENST00000407422 MYCP01106 439 aaPredicted RBP23.4■■□□□ 1.34
SMARCB1-204ENST00000407422 ATP5JP18859 108 aa23.4■■□□□ 1.34
SMARCB1-204ENST00000407422 NBPF11Q86T75 865 aa23.4■■□□□ 1.34
SMARCB1-204ENST00000407422 AS3MTQ9HBK9 375 aa23.4■■□□□ 1.34
SMARCB1-204ENST00000407422 PAG1Q9NWQ8 432 aa23.4■■□□□ 1.34
SMARCB1-204ENST00000407422 DDX60LQ5H9U9 1706 aaKnown RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms