RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 RILPL2Q969X0 211 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 OPTNQ96CV9 577 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.435e-6■■■□□ 17
TSPAN9-202ENST00000407263 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 CASP8AP2Q9UKL3 1982 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 ZSWIM8A7E2V4 1837 aa12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-202ENST00000407263 GPAA1O43292 621 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 SPRYD7Q5W111 196 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 DNAJC18Q9H819 358 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 SLC4A4Q9Y6R1 1079 aa12.38□□□□□ -0.43
TSPAN9-202ENST00000407263 ZFYP08048 801 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 CYP2D6P10635 497 aa12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 MAP2K2P36507 400 aa12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 CENPQQ7L2Z9 268 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 CCDC84Q86UT8 332 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
TSPAN9-202ENST00000407263 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 GDF11O95390 407 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 POLR3DP05423 398 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 SHROOM1Q2M3G4 852 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 SCYL3Q8IZE3 742 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
TSPAN9-202ENST00000407263 PCNTO95613 3336 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 FOXN1O15353 648 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 PLCD1P51178 756 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 MAP2K1Q02750 393 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 NOL9Q5SY16 702 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 BEGAINQ9BUH8 593 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 PICK1Q9NRD5 415 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 MGAMO43451 1857 aa12.35□□□□□ -0.43
TSPAN9-202ENST00000407263 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 UNCXA6NJT0 531 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 SMIM22K7EJ46 135 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 TBC1D12O60347 775 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 SREBF2Q12772 1141 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 ERO1BQ86YB8 467 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 SERPINB13Q9UIV8 391 aa12.34□□□□□ -0.43
TSPAN9-202ENST00000407263 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 IRF6O14896 467 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 APPP05067 770 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 TDO2P48775 406 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 PPIL2Q13356 520 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 CCL15Q16663 113 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 AMOTL1Q8IY63 956 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 DYNLL2Q96FJ2 89 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 EHD4Q9H223 541 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 DIAPH3Q9NSV4 1193 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
TSPAN9-202ENST00000407263 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 USP17L12C9JPN9 530 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 USP17L21D6R901 530 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 TRPA1O75762 1119 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 PTPRAP18433 802 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 SDSP20132 328 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 CAP2P40123 477 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 JAG1P78504 1218 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 ZNF589Q86UQ0 364 aaPredicted RBP12.32□□□□□ -0.44
TSPAN9-202ENST00000407263 HOMEZQ8IX15 550 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms