RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PLPPR2Q96GM1 343 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 ZC3H12CQ9C0D7 883 aaKnown RBP6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 CCDC86Q9H6F5 360 aaKnown RBP6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 ADAM30Q9UKF2 790 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 SBNO2Q9Y2G9 1366 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 KRBA1A5PL33 1030 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 IBSPP21815 317 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 TCEAL1Q15170 157 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 MTERF2Q49AM1 385 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 LRFN4Q6PJG9 635 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 CELF2-AS1Q8N7Q2 184 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 ST13P5Q8NFI4 369 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 ZCRB1Q8TBF4 217 aaKnown RBP6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 EDARADDQ8WWZ3 215 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 ACDQ96AP0 544 aa6.84□□□□□ -1.31
HMGB3P18-201ENST00000406327 FAM221BA6H8Z2 402 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 CDC45O75419 566 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 DDAH1O94760 285 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 PLCG1P19174 1290 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 NCAPHQ15003 741 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 TMEM201Q5SNT2 666 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 INTS3Q68E01 1043 aaKnown RBP6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 TTC6Q86TZ1 520 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 APPBP2Q92624 585 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 RNPC3Q96LT9 517 aaKnown RBP6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 CARD10Q9BWT7 1032 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 PHAXQ9H814 394 aaKnown RBP6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 ST7Q9NRC1 585 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 PICK1Q9NRD5 415 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 REV1Q9UBZ9 1251 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 PRKAB1Q9Y478 270 aa6.83□□□□□ -1.32
HMGB3P18-201ENST00000406327 A0A1W2PQH9 124 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 OIP5O43482 229 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 AMPD1P23109 780 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 CD68P34810 354 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 YARSP54577 528 aaKnown RBP6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 PLEKHG4Q58EX7 1191 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 HGSNATQ68CP4 663 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 CYFIP1Q7L576 1253 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 EEPD1Q7L9B9 569 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 NLRC3Q7RTR2 1065 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 SH3TC2Q8TF17 1288 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 KLHDC7BQ96G42 594 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 DNAJC7Q99615 494 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 RAD18Q9NS91 495 aa6.82□□□□□ -1.32
HMGB3P18-201ENST00000406327 LOC100289279A0A1B0GTE1 492 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 PRAMEF27A3QJZ7 478 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 ZNF862O60290 1169 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 GJB6O95452 261 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 PGRP06401 933 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 CCNFP41002 786 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 NLRP12P59046 1061 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 ERVK-24P63145 666 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 INPP5AQ14642 412 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 SETDB1Q15047 1291 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 ARSHQ5FYA8 562 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 OVOS1Q6IE37 1185 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 ZNF662Q6ZS27 426 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 FAM178BQ8IXR5 827 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 BTBD6Q96KE9 485 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 EPN3Q9H201 632 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 TNKS2Q9H2K2 1166 aa6.81□□□□□ -1.32
HMGB3P18-201ENST00000406327 TNFRSF10CO14798 259 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 FANCGO15287 622 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 AOC2O75106 756 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 NAT2P11245 290 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 NME1P15531 152 aaKnown RBP6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 LIG1P18858 919 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 ID3Q02535 119 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 BBS9Q3SYG4 887 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 C2orf27AQ580R0 203 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 SYNPOQ8N3V7 929 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 KCT2Q8NC54 265 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 THAP3Q8WTV1 239 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 BRINP2Q9C0B6 783 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 WNT10AQ9GZT5 417 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 CNNM2Q9H8M5 875 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 MKL2Q9ULH7 1088 aa6.8□□□□□ -1.32
HMGB3P18-201ENST00000406327 SPDYE3A6NKU9 549 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 SLC22A31A6NKX4 558 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 DCDC2CA8MYV0 355 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 PIK3R2O00459 728 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 ECEL1O95672 775 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 RAG1P15918 1043 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 SELPP16109 830 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 RAC1P63000 192 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 SNRPNP63162 240 aaKnown RBP6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 EXOSC6Q5RKV6 272 aaKnown RBP6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 VHLLQ6RSH7 139 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 C6orf15Q6UXA7 325 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 RUFY4Q6ZNE9 571 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 ATG4CQ96DT6 458 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 DHRS1Q96LJ7 313 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms