RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DYNLL2Q96FJ2 89 aa39.6■■■■□ 3.93
CSNK1E-204ENST00000403904 TOMM70O94826 608 aa39.59■■■■□ 3.93
CSNK1E-204ENST00000403904 SUPT20HL1Q3ZLR7 823 aa39.59■■■■□ 3.93
CSNK1E-204ENST00000403904 SERPINB13Q9UIV8 391 aa39.59■■■■□ 3.93
CSNK1E-204ENST00000403904 FAM196BA6NMK8 535 aa39.59■■■■□ 3.93
CSNK1E-204ENST00000403904 ITGBL1O95965 494 aaPredicted RBP39.59■■■■□ 3.93
CSNK1E-204ENST00000403904 CYP21A2P08686 494 aa39.59■■■■□ 3.93
CSNK1E-204ENST00000403904 EPB41L2O43491 1005 aaKnown RBP39.58■■■■□ 3.93
CSNK1E-204ENST00000403904 FOXP4Q8IVH2 680 aaPredicted RBP39.58■■■■□ 3.93
CSNK1E-204ENST00000403904 CRACR2BQ8N4Y2 399 aaPredicted RBP39.58■■■■□ 3.93
CSNK1E-204ENST00000403904 NBPF3Q9H094 633 aa39.58■■■■□ 3.93
CSNK1E-204ENST00000403904 EHD4Q9H223 541 aa39.58■■■■□ 3.93
CSNK1E-204ENST00000403904 ANAPC4Q9UJX5 808 aa39.58■■■■□ 3.93
CSNK1E-204ENST00000403904 CREB3L3Q68CJ9 461 aa39.57■■■■□ 3.92
CSNK1E-204ENST00000403904 SMC1BQ8NDV3 1235 aa39.57■■■■□ 3.92
CSNK1E-204ENST00000403904 SSC5DA1L4H1 1573 aa39.57■■■■□ 3.92
CSNK1E-204ENST00000403904 RBM46Q8TBY0 533 aaKnown RBP39.56■■■■□ 3.92
CSNK1E-204ENST00000403904 SLC27A2O14975 620 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 GABPAQ06546 454 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 METTL16Q86W50 562 aaKnown RBP39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 SLC44A5Q8NCS7 719 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 TRIM34Q9BYJ4 488 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 DNAJC18Q9H819 358 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 TAF6LQ9Y6J9 622 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 ROBO3Q96MS0 1386 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 HOOK2Q96ED9 719 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP39.55■■■■□ 3.926e-12■■■■■ 78.7
CSNK1E-204ENST00000403904 INCENPQ9NQS7 918 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 FZD1Q9UP38 647 aa39.55■■■■□ 3.92
CSNK1E-204ENST00000403904 HSPA4P34932 840 aa39.54■■■■□ 3.92
CSNK1E-204ENST00000403904 TBC1D10CQ8IV04 446 aa39.54■■■■□ 3.92
CSNK1E-204ENST00000403904 ZNF408Q9H9D4 720 aa39.54■■■■□ 3.92
CSNK1E-204ENST00000403904 HERC5Q9UII4 1024 aaKnown RBP39.54■■■■□ 3.92
CSNK1E-204ENST00000403904 SLC3A2P08195 630 aaKnown RBP39.53■■■■□ 3.92
CSNK1E-204ENST00000403904 C16orf86Q6ZW13 317 aa39.53■■■■□ 3.92
CSNK1E-204ENST00000403904 TACC3Q9Y6A5 838 aa39.53■■■■□ 3.92
CSNK1E-204ENST00000403904 TBC1D12O60347 775 aa39.52■■■■□ 3.92
CSNK1E-204ENST00000403904 NF2P35240 595 aa39.52■■■■□ 3.92
CSNK1E-204ENST00000403904 MAP3K10Q02779 954 aa39.52■■■■□ 3.92
CSNK1E-204ENST00000403904 PRKG1Q13976 671 aa39.52■■■■□ 3.92
CSNK1E-204ENST00000403904 CDK8P49336 464 aa39.51■■■■□ 3.92
CSNK1E-204ENST00000403904 RNF20Q5VTR2 975 aa39.51■■■■□ 3.92
CSNK1E-204ENST00000403904 DCAF15Q66K64 600 aa39.51■■■■□ 3.92
CSNK1E-204ENST00000403904 PRDM1O75626 825 aa39.5■■■■□ 3.91
CSNK1E-204ENST00000403904 AKNAD1Q5T1N1 836 aa39.5■■■■□ 3.91
CSNK1E-204ENST00000403904 RASEFQ8IZ41 740 aa39.5■■■■□ 3.91
CSNK1E-204ENST00000403904 SWAP70Q9UH65 585 aa39.5■■■■□ 3.91
CSNK1E-204ENST00000403904 MYH8P13535 1937 aa39.49■■■■□ 3.91
CSNK1E-204ENST00000403904 SHMT1P34896 483 aa39.49■■■■□ 3.91
CSNK1E-204ENST00000403904 PDE4BQ07343 736 aa39.49■■■■□ 3.91
CSNK1E-204ENST00000403904 MCCP23508 829 aa39.48■■■■□ 3.91
CSNK1E-204ENST00000403904 MFSD6Q6ZSS7 791 aa39.48■■■■□ 3.91
CSNK1E-204ENST00000403904 STAG1Q8WVM7 1258 aa39.48■■■■□ 3.91
CSNK1E-204ENST00000403904 MKNK2Q9HBH9 465 aa39.48■■■■□ 3.91
CSNK1E-204ENST00000403904 PPP1R12BO60237 982 aaPredicted RBP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 CELF2O95319 508 aaKnown RBP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 ZNF341Q9BYN7 854 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 UPF2Q9HAU5 1272 aaKnown RBP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 TRPM7Q96QT4 1865 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 USP2O75604 605 aaPredicted RBP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 ZKSCAN1P17029 563 aaPredicted RBP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 TATDN1Q6P1N9 297 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 STOX1Q6ZVD7 989 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 KCNB2Q92953 911 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 RNF41Q9H4P4 317 aaPredicted RBP39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 TOMM22Q9NS69 142 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 PASKQ96RG2 1323 aa39.46■■■■□ 3.91
CSNK1E-204ENST00000403904 E7EWF7 191 aa39.45■■■■□ 3.91
CSNK1E-204ENST00000403904 FGRP09769 529 aa39.45■■■■□ 3.91
CSNK1E-204ENST00000403904 ZNF287Q9HBT7 754 aa39.45■■■■□ 3.91
CSNK1E-204ENST00000403904 TAOK2Q9UL54 1235 aa39.45■■■■□ 3.91
CSNK1E-204ENST00000403904 SNX14Q9Y5W7 946 aa39.45■■■■□ 3.91
CSNK1E-204ENST00000403904 NEDD4P46934 1319 aa39.45■■■■□ 3.91
CSNK1E-204ENST00000403904 PHF20L1A8MW92 1017 aa39.44■■■■□ 3.9
CSNK1E-204ENST00000403904 TTLL12Q14166 644 aaPredicted RBP39.44■■■■□ 3.9
CSNK1E-204ENST00000403904 RRP12Q5JTH9 1297 aaKnown RBP39.44■■■■□ 3.9
CSNK1E-204ENST00000403904 MOB2Q70IA6 237 aa39.44■■■■□ 3.9
CSNK1E-204ENST00000403904 FSTL1Q12841 308 aa39.43■■■■□ 3.9
CSNK1E-204ENST00000403904 RRP1BQ14684 758 aaKnown RBP39.43■■■■□ 3.9
CSNK1E-204ENST00000403904 ANGEL1Q9UNK9 670 aaKnown RBP39.43■■■■□ 3.9
CSNK1E-204ENST00000403904 RASA1P20936 1047 aa39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 CST9Q5W186 159 aa39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 KLRG1Q96E93 195 aa39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 C22orf23Q9BZE7 217 aa39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 PCP11498 1178 aaKnown RBP39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 TSGA10IPQ3SY00 556 aa39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 CERKLQ49MI3 558 aaPredicted RBP39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 WRNIP1Q96S55 665 aa39.42■■■■□ 3.9
CSNK1E-204ENST00000403904 ORC4O43929 436 aa39.41■■■■□ 3.9
CSNK1E-204ENST00000403904 NKX2-3Q8TAU0 364 aa39.41■■■■□ 3.9
CSNK1E-204ENST00000403904 ZNF112Q9UJU3 913 aa39.41■■■■□ 3.9
CSNK1E-204ENST00000403904 ZNF444Q8N0Y2 327 aaPredicted RBP39.4■■■■□ 3.9
CSNK1E-204ENST00000403904 GDF11O95390 407 aa39.39■■■■□ 3.9
CSNK1E-204ENST00000403904 INPP5BP32019 993 aa39.39■■■■□ 3.9
CSNK1E-204ENST00000403904 ADCK5Q3MIX3 580 aa39.39■■■■□ 3.9
CSNK1E-204ENST00000403904 GBA2Q9HCG7 927 aaPredicted RBP39.39■■■■□ 3.9
CSNK1E-204ENST00000403904 RANBP6O60518 1105 aaKnown RBP39.38■■■■□ 3.9
CSNK1E-204ENST00000403904 IREB2P48200 963 aaKnown RBP39.38■■■■□ 3.9
CSNK1E-204ENST00000403904 TRDNQ13061 729 aa39.38■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms