RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 IQSEC3Q9UPP2 1182 aaPredicted RBP11.76□□□□□ -0.53
NUP43-204ENST00000403890 ZHX2Q9Y6X8 837 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 PRUNE2Q8WUY3 3088 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 PFASO15067 1338 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
NUP43-204ENST00000403890 TCP10Q12799 353 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 RALBP1Q15311 655 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 FBXO33Q7Z6M2 555 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 LBHD1Q9BQE6 289 aaPredicted RBP11.75□□□□□ -0.53
NUP43-204ENST00000403890 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 MAST3O60307 1309 aa11.75□□□□□ -0.53
NUP43-204ENST00000403890 COL6A1P12109 1028 aa11.74□□□□□ -0.53
NUP43-204ENST00000403890 PTPRAP18433 802 aa11.74□□□□□ -0.53
NUP43-204ENST00000403890 TRIM32Q13049 653 aa11.74□□□□□ -0.53
NUP43-204ENST00000403890 SEMA6BQ9H3T3 888 aa11.74□□□□□ -0.53
NUP43-204ENST00000403890 GJD2Q9UKL4 321 aa11.74□□□□□ -0.53
NUP43-204ENST00000403890 AFG3L2Q9Y4W6 797 aa11.74□□□□□ -0.53
NUP43-204ENST00000403890 EYSQ5T1H1 3165 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
NUP43-204ENST00000403890 FAM110CQ1W6H9 321 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 LRRC26Q2I0M4 334 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 CAVIN4Q5BKX8 364 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 SCYL3Q8IZE3 742 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
NUP43-204ENST00000403890 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 PLA2G5P39877 138 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 FLIIQ13045 1269 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
NUP43-204ENST00000403890 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
NUP43-204ENST00000403890 FAM122AQ96E09 287 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 RAPGEFL1Q9UHV5 662 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 AGTPBP1Q9UPW5 1226 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
NUP43-204ENST00000403890 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
NUP43-204ENST00000403890 APAF1O14727 1248 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.53
NUP43-204ENST00000403890 NFIAQ12857 509 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 MAP3K21Q5TCX8 1036 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 CDC42EP5Q6NZY7 148 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 TMEM92Q6UXU6 159 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 MYLIPQ8WY64 445 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 TRIB2Q92519 343 aa11.71□□□□□ -0.53
NUP43-204ENST00000403890 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
NUP43-204ENST00000403890 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
NUP43-204ENST00000403890 NCOR1O75376 2440 aa11.71□□□□□ -0.54
NUP43-204ENST00000403890 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
NUP43-204ENST00000403890 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
NUP43-204ENST00000403890 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
NUP43-204ENST00000403890 FOSL2P15408 326 aa11.7□□□□□ -0.54
NUP43-204ENST00000403890 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
NUP43-204ENST00000403890 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
NUP43-204ENST00000403890 LRRFIP2Q9Y608 721 aaKnown RBP11.7□□□□□ -0.54
NUP43-204ENST00000403890 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
NUP43-204ENST00000403890 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
NUP43-204ENST00000403890 XRCC5P13010 732 aaKnown RBP11.69□□□□□ -0.54
NUP43-204ENST00000403890 CYP2B6P20813 491 aa11.69□□□□□ -0.54
NUP43-204ENST00000403890 TREML2Q5T2D2 321 aa11.69□□□□□ -0.54
NUP43-204ENST00000403890 ZFPM1Q8IX07 1006 aa11.69□□□□□ -0.54
NUP43-204ENST00000403890 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
NUP43-204ENST00000403890 PRKAG2Q9UGJ0 569 aa11.69□□□□□ -0.54
NUP43-204ENST00000403890 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
NUP43-204ENST00000403890 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
NUP43-204ENST00000403890 SMAD3P84022 425 aaKnown RBP11.68□□□□□ -0.54
NUP43-204ENST00000403890 SHHQ15465 462 aa11.68□□□□□ -0.54
NUP43-204ENST00000403890 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
NUP43-204ENST00000403890 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
NUP43-204ENST00000403890 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
NUP43-204ENST00000403890 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
NUP43-204ENST00000403890 TTYH1Q9H313 450 aaPredicted RBP11.68□□□□□ -0.54
NUP43-204ENST00000403890 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 GRM8O00222 908 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 MAP3K10Q02779 954 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 CACNB2Q08289 660 aaPredicted RBP11.67□□□□□ -0.54
NUP43-204ENST00000403890 PABPC4Q13310 644 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUP43-204ENST00000403890 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 METTL24Q5JXM2 366 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 BEND3Q5T5X7 828 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
NUP43-204ENST00000403890 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
NUP43-204ENST00000403890 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
NUP43-204ENST00000403890 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
NUP43-204ENST00000403890 F6X3S4 739 aa11.66□□□□□ -0.54
NUP43-204ENST00000403890 PDE8BO95263 885 aa11.66□□□□□ -0.54
NUP43-204ENST00000403890 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
NUP43-204ENST00000403890 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
NUP43-204ENST00000403890 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
NUP43-204ENST00000403890 MORF4L1Q9UBU8 362 aa11.66□□□□□ -0.54
NUP43-204ENST00000403890 ENTPD3O75355 529 aa11.65□□□□□ -0.54
NUP43-204ENST00000403890 IFIT1P09914 478 aaKnown RBP11.65□□□□□ -0.54
NUP43-204ENST00000403890 ZKSCAN1P17029 563 aaPredicted RBP11.65□□□□□ -0.54
NUP43-204ENST00000403890 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
NUP43-204ENST00000403890 RGS3P49796 1198 aa11.65□□□□□ -0.54
NUP43-204ENST00000403890 SPP2Q13103 211 aa11.65□□□□□ -0.54
NUP43-204ENST00000403890 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms