RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 CCDC82Q8N4S0 544 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 JMYQ8N9B5 988 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 NUP133Q8WUM0 1156 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 FBXW7Q969H0 707 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 BRIP1Q9BX63 1249 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 NAT10Q9H0A0 1025 aaKnown RBP19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 CDC25BP30305 580 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 CMTR1Q8N1G2 835 aaKnown RBP19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 CLIP2Q9UDT6 1046 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 CCNL1Q9UK58 526 aaPredicted RBP19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 TNKSO95271 1327 aa19.6■□□□□ 0.73
DNMT3A-205ENST00000402667 CYP2D7A0A087X1C5 515 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 BTBD18B2RXH4 712 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 MMP1P03956 469 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 SHC4Q6S5L8 630 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 NOSTRINQ8IVI9 506 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 NSUN4Q96CB9 384 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 ANKRD2Q9GZV1 360 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 TFCP2L1Q9NZI6 479 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 RTCBQ9Y3I0 505 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 DEXIO95424 95 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 FAM182BQ5T319 152 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 KCNJ14Q9UNX9 436 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 HPSEQ9Y251 543 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 BTAF1O14981 1849 aa19.59■□□□□ 0.73
DNMT3A-205ENST00000402667 SYKP43405 635 aa19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 SAFBQ15424 915 aaKnown RBP eCLIP19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 DPCR1Q3MIW9 517 aa19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 AOPEPQ8N6M6 819 aa19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 ARHGEF1Q92888 912 aaKnown RBP19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 MRFAP1L1Q96HT8 127 aa19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 TIGD1Q96MW7 591 aa19.58■□□□□ 0.73
DNMT3A-205ENST00000402667 UBAP1LF5GYI3 381 aa19.58■□□□□ 0.72
DNMT3A-205ENST00000402667 TM4SF1P30408 202 aa19.58■□□□□ 0.72
DNMT3A-205ENST00000402667 MECOMQ03112 1051 aa19.58■□□□□ 0.72
DNMT3A-205ENST00000402667 ZRSR1Q15695 479 aaKnown RBP19.58■□□□□ 0.72
DNMT3A-205ENST00000402667 DIS3L2Q8IYB7 885 aaKnown RBP19.58■□□□□ 0.72
DNMT3A-205ENST00000402667 BAZ2AQ9UIF9 1905 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 PDS5AQ29RF7 1337 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 UQCRHLA0A096LP55 91 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 FAM237AA0A1B0GTK4 181 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 UQCRHP07919 91 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 LRMPQ12912 555 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 CTR9Q6PD62 1173 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 ENAHQ8N8S7 591 aaPredicted RBP19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 CLIC6Q96NY7 704 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 ZSCAN10Q96SZ4 725 aaPredicted RBP19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 COL24A1Q17RW2 1714 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 FGRP09769 529 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 CCDC144BQ3MJ40 725 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 USP21Q9UK80 565 aa19.57■□□□□ 0.72
DNMT3A-205ENST00000402667 MYH2Q9UKX2 1941 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 CUTAO60888 179 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 TOB1P50616 345 aaPredicted RBP19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 PPP2R5BQ15173 497 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 RESP18Q5W5W9 173 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 BPIFA3Q9BQP9 254 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 FOXP1Q9H334 677 aaPredicted RBP19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 USP17L12C9JPN9 530 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 USP17L21D6R901 530 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 BIN1O00499 593 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 PRDM1O75626 825 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 NLRP12P59046 1061 aa19.56■□□□□ 0.72
DNMT3A-205ENST00000402667 PCP11498 1178 aaKnown RBP19.55■□□□□ 0.72
DNMT3A-205ENST00000402667 CHAF1AQ13111 956 aaPredicted RBP19.55■□□□□ 0.72
DNMT3A-205ENST00000402667 DUOX1Q9NRD9 1551 aa19.55■□□□□ 0.72
DNMT3A-205ENST00000402667 PRDX5P30044 214 aa19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 TXNRD3Q86VQ6 643 aa19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 RNF26Q9BY78 433 aaPredicted RBP19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 AATFQ9NY61 560 aaKnown RBP eCLIP19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 IFIT1BQ5T764 474 aaKnown RBP19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 IQCA1Q86XH1 822 aa19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 CACTINQ8WUQ7 758 aaKnown RBP19.54■□□□□ 0.72
DNMT3A-205ENST00000402667 NR5A1Q13285 461 aa19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 RILPL1Q5EBL4 403 aa19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 KRI1Q8N9T8 703 aaKnown RBP19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 NHSQ6T4R5 1651 aa19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 EVX2Q03828 476 aa19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 CRNKL1Q9BZJ0 848 aaKnown RBP19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 DCP1AQ9NPI6 582 aaPredicted RBP19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 TUBE1Q9UJT0 475 aa19.53■□□□□ 0.72
DNMT3A-205ENST00000402667 MYH13Q9UKX3 1938 aa19.52■□□□□ 0.72
DNMT3A-205ENST00000402667 FUT2Q10981 343 aa19.52■□□□□ 0.72
DNMT3A-205ENST00000402667 OXER1Q8TDS5 423 aa19.52■□□□□ 0.72
DNMT3A-205ENST00000402667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.52■□□□□ 0.72
DNMT3A-205ENST00000402667 IRS2Q9Y4H2 1338 aa19.52■□□□□ 0.72
DNMT3A-205ENST00000402667 NPHP1O15259 732 aa19.52■□□□□ 0.71
DNMT3A-205ENST00000402667 RFC4P35249 363 aa19.52■□□□□ 0.71
DNMT3A-205ENST00000402667 AKAP17AQ02040 695 aaKnown RBP19.52■□□□□ 0.71
DNMT3A-205ENST00000402667 PRIMPOLQ96LW4 560 aa19.52■□□□□ 0.71
DNMT3A-205ENST00000402667 KCNH3Q9ULD8 1083 aa19.52■□□□□ 0.71
DNMT3A-205ENST00000402667 JAG2Q9Y219 1238 aa19.52■□□□□ 0.71
DNMT3A-205ENST00000402667 THSD7AQ9UPZ6 1657 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 TROAPQ12815 778 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms