RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 TJP1Q07157 1748 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 CYP2D7A0A087X1C5 515 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 ERVV-2B6SEH9 535 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 BCAMP50895 628 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 SPATA31A3Q5VYP0 1347 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
PPP4R1-203ENST00000400556 SOWAHDA6NJG2 315 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 PPP6R2O75170 966 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 CSF1RP07333 972 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 GABPB1Q06547 395 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 VPS54Q9P1Q0 977 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 SLC4A4Q9Y6R1 1079 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 MST1RQ04912 1400 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 TMEM139Q8IV31 216 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 GLI3P10071 1580 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 WNT7AO00755 349 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 CUTAO60888 179 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 EARS2Q5JPH6 523 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 MFSD6Q6ZSS7 791 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
PPP4R1-203ENST00000400556 RTN1Q16799 776 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 TC2NQ8N9U0 490 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 SMARCE1Q969G3 411 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 PUF60Q9UHX1 559 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 EVX2Q03828 476 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 CASQ1P31415 396 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 WTAPQ15007 396 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 NEK11Q8NG66 645 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
PPP4R1-203ENST00000400556 A0A087X0B3 334 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 TCRBV5S4A2TA0A5A2 114 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 TADA3O75528 432 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 FBXO2Q9UK22 296 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 SASH3O75995 380 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 MMP1P03956 469 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 TRIM22Q8IYM9 498 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 VGLL2Q8N8G2 317 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 STARD3NLO95772 234 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 ABL1P00519 1130 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 CCT6AP40227 531 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 UBE3CQ15386 1083 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 LRP2BPQ9P2M1 347 aa12.09□□□□□ -0.47
PPP4R1-203ENST00000400556 CDC25AP30304 524 aa12.08□□□□□ -0.47
PPP4R1-203ENST00000400556 MDM2Q00987 491 aaPredicted RBP12.08□□□□□ -0.47
PPP4R1-203ENST00000400556 SHISA4Q96DD7 197 aa12.08□□□□□ -0.47
PPP4R1-203ENST00000400556 BLZF1Q9H2G9 400 aa12.08□□□□□ -0.47
PPP4R1-203ENST00000400556 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 ARHGAP6O43182 974 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 SPECC1LQ69YQ0 1117 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 EEF2KMTQ96G04 330 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 MPHOSPH8Q99549 860 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 MTMR7Q9Y216 660 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 ST5P78524 1137 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 ZNF174Q15697 407 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 KCND1Q9NSA2 647 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
PPP4R1-203ENST00000400556 ZSCAN12O43309 604 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 BRINP3Q76B58 766 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 ADGRA1Q86SQ6 560 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 COL18A1P39060 1754 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 ERICH2A1L162 156 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 AKAP11Q9UKA4 1901 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 IFNAR1P17181 557 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 PTPREP23469 700 aa12.07□□□□□ -0.48
PPP4R1-203ENST00000400556 DZIP3Q86Y13 1208 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms