RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 M0R2C6 588 aa9□□□□□ -0.97
USP16-204ENST00000399976 SLC3A2P08195 630 aaKnown RBP9□□□□□ -0.97
USP16-204ENST00000399976 NFIAQ12857 509 aa9□□□□□ -0.97
USP16-204ENST00000399976 NMIQ13287 307 aaPredicted RBP9□□□□□ -0.97
USP16-204ENST00000399976 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
USP16-204ENST00000399976 EDC3Q96F86 508 aaKnown RBP9□□□□□ -0.97
USP16-204ENST00000399976 WDR18Q9BV38 432 aa9□□□□□ -0.97
USP16-204ENST00000399976 KCNH4Q9UQ05 1017 aa9□□□□□ -0.97
USP16-204ENST00000399976 WDR19Q8NEZ3 1342 aa9□□□□□ -0.97
USP16-204ENST00000399976 SPDYE5A6NIY4 337 aa9□□□□□ -0.97
USP16-204ENST00000399976 USP5P45974 858 aa9□□□□□ -0.97
USP16-204ENST00000399976 MAP3K9P80192 1104 aa9□□□□□ -0.97
USP16-204ENST00000399976 PPATQ06203 517 aa9□□□□□ -0.97
USP16-204ENST00000399976 PPIL2Q13356 520 aa9□□□□□ -0.97
USP16-204ENST00000399976 CCDC178Q5BJE1 867 aa9□□□□□ -0.97
USP16-204ENST00000399976 ZNF526Q8TF50 670 aaPredicted RBP9□□□□□ -0.97
USP16-204ENST00000399976 VEZTQ9HBM0 779 aa9□□□□□ -0.97
USP16-204ENST00000399976 TCP11L1Q9NUJ3 509 aa9□□□□□ -0.97
USP16-204ENST00000399976 SERPINB13Q9UIV8 391 aa9□□□□□ -0.97
USP16-204ENST00000399976 PCDHAC2Q9Y5I4 1007 aa9□□□□□ -0.97
USP16-204ENST00000399976 SLC4A4Q9Y6R1 1079 aa9□□□□□ -0.97
USP16-204ENST00000399976 RLFQ13129 1914 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 RBBP6Q7Z6E9 1792 aaKnown RBP8.99□□□□□ -0.97
USP16-204ENST00000399976 CLRN2A0PK11 232 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 FOXP2O15409 715 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 DYNLL1P63167 89 aaKnown RBP8.99□□□□□ -0.97
USP16-204ENST00000399976 SH3D19Q5HYK7 790 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 SCYL3Q8IZE3 742 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 IFNL3Q8IZI9 196 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 JMYQ8N9B5 988 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 CSRNP1Q96S65 589 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 SAGE1Q9NXZ1 904 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 U3KPZ7 1027 aaPredicted RBP8.99□□□□□ -0.97
USP16-204ENST00000399976 A0A0D9SFI3 127 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 CELF2O95319 508 aaKnown RBP8.99□□□□□ -0.97
USP16-204ENST00000399976 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
USP16-204ENST00000399976 RGMBQ6NW40 437 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 CTR9Q6PD62 1173 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 TGFBRAP1Q8WUH2 860 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 TMEM39BQ9GZU3 492 aa8.99□□□□□ -0.97
USP16-204ENST00000399976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP16-204ENST00000399976 DDTLA6NHG4 134 aaPredicted RBP8.98□□□□□ -0.97
USP16-204ENST00000399976 TCP10L2B9ZVM9 353 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 CXCL11O14625 94 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 HSPD1P10809 573 aaKnown RBP8.98□□□□□ -0.97
USP16-204ENST00000399976 NBPF12Q5TAG4 269 aaPredicted RBP8.98□□□□□ -0.97
USP16-204ENST00000399976 TSHZ3Q63HK5 1081 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 ERO1BQ86YB8 467 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 STAG1Q8WVM7 1258 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 C12orf42Q96LP6 360 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 ESYT1Q9BSJ8 1104 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 RNF41Q9H4P4 317 aaPredicted RBP8.98□□□□□ -0.97
USP16-204ENST00000399976 ARMT1Q9H993 441 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 EPB41L4AQ9HCS5 686 aaPredicted RBP8.98□□□□□ -0.97
USP16-204ENST00000399976 ASNSP08243 561 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 CAP2P40123 477 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 MAP4K1Q92918 833 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 AS3MTQ9HBK9 375 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 NDUFB9Q9Y6M9 179 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 MGAMO43451 1857 aa8.98□□□□□ -0.97
USP16-204ENST00000399976 FAM155AB1AL88 458 aaPredicted RBP8.97□□□□□ -0.97
USP16-204ENST00000399976 CA12O43570 354 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 NOGQ13253 232 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 RCSD1Q6JBY9 416 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 RASAL3Q86YV0 1011 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 RILPL2Q969X0 211 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 MAF1Q9H063 256 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 IGKV6D-41A0A0C4DH26 115 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 MANSC4A6NHS7 340 aaPredicted RBP8.97□□□□□ -0.97
USP16-204ENST00000399976 FBXL16Q8N461 479 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 MIGA1Q8NAN2 632 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 GTF3C2Q8WUA4 911 aaPredicted RBP8.97□□□□□ -0.97
USP16-204ENST00000399976 ANKS1AQ92625 1134 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 CSADQ9Y600 493 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 SNCAIPQ9Y6H5 919 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 SHMT1P34896 483 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 TM4SF4P48230 202 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.97□□□□□ -0.97
USP16-204ENST00000399976 TMEM179Q6ZVK1 233 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
USP16-204ENST00000399976 WNK4Q96J92 1243 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 SH2D4AQ9H788 454 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 DNAJC18Q9H819 358 aa8.97□□□□□ -0.97
USP16-204ENST00000399976 CASP8AP2Q9UKL3 1982 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 C19orf81C9J6K1 198 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 REC8O95072 547 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 PDE4BQ07343 736 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 SREBF2Q12772 1141 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 MYPNQ86TC9 1320 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 MAPKAPK5Q8IW41 473 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 FAM227BQ96M60 508 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 NAPBQ9H115 298 aa8.96□□□□□ -0.97
USP16-204ENST00000399976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.96□□□□□ -0.97
USP16-204ENST00000399976 TRAF5O00463 557 aa8.96□□□□□ -0.98
USP16-204ENST00000399976 ALDH1A1P00352 501 aa8.96□□□□□ -0.98
USP16-204ENST00000399976 PPARAQ07869 468 aa8.96□□□□□ -0.98
USP16-204ENST00000399976 ZFPM1Q8IX07 1006 aa8.96□□□□□ -0.98
USP16-204ENST00000399976 MKL1Q969V6 931 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms