RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
CYCSP55-201ENST00000399027 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
CYCSP55-201ENST00000399027 EHD4Q9H223 541 aa12.54□□□□□ -0.4
CYCSP55-201ENST00000399027 HERC5Q9UII4 1024 aaKnown RBP12.54□□□□□ -0.4
CYCSP55-201ENST00000399027 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
CYCSP55-201ENST00000399027 GREB1LQ9C091 1923 aaPredicted RBP12.54□□□□□ -0.4
CYCSP55-201ENST00000399027 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
CYCSP55-201ENST00000399027 FOXP2O15409 715 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 SLC10A3P09131 477 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 SLURP2P0DP57 97 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 ECE1P42892 770 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 PLCD1P51178 756 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 GABPAQ06546 454 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 VGLL4Q14135 290 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 CYP4F22Q6NT55 531 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 ZNF589Q86UQ0 364 aaPredicted RBP12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 WRNIP1Q96S55 665 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 DNAJC18Q9H819 358 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 EPB41L4AQ9HCS5 686 aaPredicted RBP12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 DIAPH3Q9NSV4 1193 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.41
CYCSP55-201ENST00000399027 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 CHMLP26374 656 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 INPP5BP32019 993 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 VEGFBP49765 207 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 ZNF157P51786 506 aaPredicted RBP12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 CTR9Q6PD62 1173 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 IFNL3Q8IZI9 196 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 RAD50Q92878 1312 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
CYCSP55-201ENST00000399027 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 USP17L21D6R901 530 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 ALX1Q15699 326 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 ZKSCAN4Q969J2 545 aaPredicted RBP12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 CSADQ9Y600 493 aa12.5□□□□□ -0.41
CYCSP55-201ENST00000399027 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 CYP2D6P10635 497 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 CAP2P40123 477 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 EVX2Q03828 476 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 NOGQ13253 232 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 RUFY2Q8WXA3 655 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 IL25Q9H293 177 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
CYCSP55-201ENST00000399027 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 CYP2D7A0A087X1C5 515 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 APPP05067 770 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 SHMT1P34896 483 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 GJA5P36382 358 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 MAP2K2P36507 400 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 TDO2P48775 406 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 PPATQ06203 517 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 C16orf86Q6ZW13 317 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 JMYQ8N9B5 988 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 OPTNQ96CV9 577 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 TRIM34Q9BYJ4 488 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms