RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 HERC5Q9UII4 1024 aaKnown RBP30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 SLC4A4Q9Y6R1 1079 aa30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 OTOFQ9HC10 1997 aa30.51■■■□□ 2.47
TSPAN4-207ENST00000397411 FAM196BA6NMK8 535 aa30.5■■■□□ 2.47
TSPAN4-207ENST00000397411 SLURP2P0DP57 97 aa30.5■■■□□ 2.47
TSPAN4-207ENST00000397411 ERO1BQ86YB8 467 aa30.5■■■□□ 2.47
TSPAN4-207ENST00000397411 PICK1Q9NRD5 415 aa30.5■■■□□ 2.47
TSPAN4-207ENST00000397411 SNCAIPQ9Y6H5 919 aa30.5■■■□□ 2.47
TSPAN4-207ENST00000397411 SREBF2Q12772 1141 aa30.49■■■□□ 2.47
TSPAN4-207ENST00000397411 CCDC136Q96JN2 1154 aa30.49■■■□□ 2.47
TSPAN4-207ENST00000397411 ATP8A2Q9NTI2 1148 aa30.49■■■□□ 2.47
TSPAN4-207ENST00000397411 MANSC4A6NHS7 340 aaPredicted RBP30.48■■■□□ 2.47
TSPAN4-207ENST00000397411 PHF20L1A8MW92 1017 aa30.48■■■□□ 2.47
TSPAN4-207ENST00000397411 PRKAB2O43741 272 aa30.48■■■□□ 2.47
TSPAN4-207ENST00000397411 CTNND1O60716 968 aaKnown RBP30.48■■■□□ 2.47
TSPAN4-207ENST00000397411 AMOTL1Q8IY63 956 aa30.48■■■□□ 2.47
TSPAN4-207ENST00000397411 OSBP2Q969R2 916 aa30.48■■■□□ 2.47
TSPAN4-207ENST00000397411 CENPQQ7L2Z9 268 aaPredicted RBP30.47■■■□□ 2.47
TSPAN4-207ENST00000397411 CNKSR2Q8WXI2 1034 aa30.47■■■□□ 2.47
TSPAN4-207ENST00000397411 THSD7BQ9C0I4 1608 aa30.47■■■□□ 2.47
TSPAN4-207ENST00000397411 SPDYE5A6NIY4 337 aa30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 PDE4AP27815 886 aa30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 INHBEP58166 350 aa30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 NOL9Q5SY16 702 aaKnown RBP30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 SCYL3Q8IZE3 742 aa30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 STRBPQ96SI9 672 aaKnown RBP30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 DCP1AQ9NPI6 582 aaPredicted RBP30.46■■■□□ 2.47
TSPAN4-207ENST00000397411 GJA5P36382 358 aa30.45■■■□□ 2.47
TSPAN4-207ENST00000397411 PPATQ06203 517 aa30.45■■■□□ 2.47
TSPAN4-207ENST00000397411 GPAA1O43292 621 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 CA12O43570 354 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 APPP05067 770 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 GNAT2P19087 354 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 ZMYM1Q5SVZ6 1142 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 SERPINB13Q9UIV8 391 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 NAV1Q8NEY1 1877 aa30.44■■■□□ 2.46
TSPAN4-207ENST00000397411 M0R2C6 588 aa30.43■■■□□ 2.46
TSPAN4-207ENST00000397411 FOXN1O15353 648 aa30.43■■■□□ 2.46
TSPAN4-207ENST00000397411 TM4SF4P48230 202 aa30.43■■■□□ 2.46
TSPAN4-207ENST00000397411 CTCFP49711 727 aaPredicted RBP30.43■■■□□ 2.46
TSPAN4-207ENST00000397411 GTF2A2P52657 109 aa30.43■■■□□ 2.46
TSPAN4-207ENST00000397411 PPIL2Q13356 520 aa30.43■■■□□ 2.46
TSPAN4-207ENST00000397411 PLCD1P51178 756 aa30.42■■■□□ 2.46
TSPAN4-207ENST00000397411 TICAM2Q86XR7 235 aa30.42■■■□□ 2.46
TSPAN4-207ENST00000397411 SEC62Q99442 399 aaKnown RBP30.42■■■□□ 2.46
TSPAN4-207ENST00000397411 TRPA1O75762 1119 aa30.41■■■□□ 2.46
TSPAN4-207ENST00000397411 CAP2P40123 477 aa30.41■■■□□ 2.46
TSPAN4-207ENST00000397411 OTUD7BQ6GQQ9 843 aa30.41■■■□□ 2.46
TSPAN4-207ENST00000397411 EHD4Q9H223 541 aa30.41■■■□□ 2.46
TSPAN4-207ENST00000397411 ZHX2Q9Y6X8 837 aa30.41■■■□□ 2.46
TSPAN4-207ENST00000397411 SNAPC2Q13487 334 aa30.4■■■□□ 2.46
TSPAN4-207ENST00000397411 METTL16Q86W50 562 aaKnown RBP30.4■■■□□ 2.46
TSPAN4-207ENST00000397411 RNF186Q9NXI6 227 aa30.4■■■□□ 2.46
TSPAN4-207ENST00000397411 BAZ2AQ9UIF9 1905 aaKnown RBP30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 USP17L12C9JPN9 530 aa30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 USP17L21D6R901 530 aa30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 IRF6O14896 467 aa30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 PTPRAP18433 802 aa30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 NACAP1Q9BZK3 213 aa30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 HELLSQ9NRZ9 838 aa30.39■■■□□ 2.46
TSPAN4-207ENST00000397411 CCL15-CCL14A0A0B4J2E2 113 aa30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 PATL2C9JE40 543 aaKnown RBP30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 CYP2D6P10635 497 aa30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 CETPP11597 493 aa30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 CCL15Q16663 113 aa30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 TTC22Q5TAA0 569 aa30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 TSKSQ9UJT2 592 aa30.38■■■□□ 2.45
TSPAN4-207ENST00000397411 GSG1L2A8MUP6 293 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 ALDH1A1P00352 501 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 SDSP20132 328 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 TDO2P48775 406 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 GIMAP6Q6P9H5 292 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 IFNL1Q8IU54 200 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 DNAJC18Q9H819 358 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 DIAPH3Q9NSV4 1193 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 SAGE1Q9NXZ1 904 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 SIPA1L1O43166 1804 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 DOCK1Q14185 1865 aa30.37■■■□□ 2.45
TSPAN4-207ENST00000397411 GDF11O95390 407 aa30.36■■■□□ 2.45
TSPAN4-207ENST00000397411 RRP1BQ14684 758 aaKnown RBP30.36■■■□□ 2.45
TSPAN4-207ENST00000397411 CERKLQ49MI3 558 aaPredicted RBP30.36■■■□□ 2.45
TSPAN4-207ENST00000397411 MCMDC2Q4G0Z9 681 aa30.36■■■□□ 2.45
TSPAN4-207ENST00000397411 MS4A4AQ96JQ5 239 aa30.36■■■□□ 2.45
TSPAN4-207ENST00000397411 MINDY4BA8MYZ0 360 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 HIP1O00291 1037 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 CXCL11O14625 94 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 ASNSP08243 561 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 LBX1P52954 281 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 NMIQ13287 307 aaPredicted RBP30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 C12orf60Q5U649 245 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 CTR9Q6PD62 1173 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 CCDC129Q6ZRS4 1044 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 FAM227BQ96M60 508 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 GINM1Q9NU53 330 aa30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 ARPP21Q9UBL0 812 aaPredicted RBP30.35■■■□□ 2.45
TSPAN4-207ENST00000397411 USP17L5A8MUK1 530 aa30.34■■■□□ 2.45
TSPAN4-207ENST00000397411 AS3MTQ9HBK9 375 aa30.34■■■□□ 2.45
TSPAN4-207ENST00000397411 CABP5Q9NP86 173 aa30.34■■■□□ 2.45
TSPAN4-207ENST00000397411 SWAP70Q9UH65 585 aa30.34■■■□□ 2.45
TSPAN4-207ENST00000397411 ATAD5Q96QE3 1844 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms