RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SPRYD7Q5W111 196 aa25.47■■□□□ 1.67
TSPAN4-206ENST00000397408 WNK4Q96J92 1243 aa25.47■■□□□ 1.67
TSPAN4-206ENST00000397408 STRBPQ96SI9 672 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-206ENST00000397408 SEC62Q99442 399 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-206ENST00000397408 MCM9Q9NXL9 1143 aa25.47■■□□□ 1.67
TSPAN4-206ENST00000397408 HERC5Q9UII4 1024 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-206ENST00000397408 PHF20L1A8MW92 1017 aa25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 KIF23Q02241 960 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 TTC22Q5TAA0 569 aa25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 CRACR2BQ8N4Y2 399 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 TRIM34Q9BYJ4 488 aa25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 ATP8A2Q9NTI2 1148 aa25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 CNKSR2Q8WXI2 1034 aa25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 OPTNQ96CV9 577 aa25.46■■□□□ 1.67
TSPAN4-206ENST00000397408 BAZ2AQ9UIF9 1905 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 POLR3DP05423 398 aaPredicted RBP25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 ZBTB48P10074 688 aaPredicted RBP25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 GSPT1P15170 499 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 GJA5P36382 358 aa25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 NOL9Q5SY16 702 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 ERICH6BQ5W0A0 696 aa25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 TTC6Q86TZ1 520 aa25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 DNAJC18Q9H819 358 aa25.45■■□□□ 1.66
TSPAN4-206ENST00000397408 SPDYE5A6NIY4 337 aa25.44■■□□□ 1.66
TSPAN4-206ENST00000397408 MAP2K1Q02750 393 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-206ENST00000397408 TICAM2Q86XR7 235 aa25.44■■□□□ 1.66
TSPAN4-206ENST00000397408 FOXP4Q8IVH2 680 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-206ENST00000397408 OTUD5Q96G74 571 aa25.44■■□□□ 1.66
TSPAN4-206ENST00000397408 DDRGK1Q96HY6 314 aa25.44■■□□□ 1.66
TSPAN4-206ENST00000397408 METTL16Q86W50 562 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-206ENST00000397408 SCYL3Q8IZE3 742 aa25.43■■□□□ 1.66
TSPAN4-206ENST00000397408 FAM227BQ96M60 508 aa25.43■■□□□ 1.66
TSPAN4-206ENST00000397408 EHD4Q9H223 541 aa25.43■■□□□ 1.66
TSPAN4-206ENST00000397408 SERPINB13Q9UIV8 391 aa25.43■■□□□ 1.66
TSPAN4-206ENST00000397408 DOCK1Q14185 1865 aa25.43■■□□□ 1.66
TSPAN4-206ENST00000397408 CYP2D6P10635 497 aa25.42■■□□□ 1.66
TSPAN4-206ENST00000397408 GNAT2P19087 354 aa25.42■■□□□ 1.66
TSPAN4-206ENST00000397408 PLCD1P51178 756 aa25.42■■□□□ 1.66
TSPAN4-206ENST00000397408 CCDC129Q6ZRS4 1044 aa25.42■■□□□ 1.66
TSPAN4-206ENST00000397408 SKAP1Q86WV1 359 aa25.42■■□□□ 1.66
TSPAN4-206ENST00000397408 ERO1BQ86YB8 467 aa25.42■■□□□ 1.66
TSPAN4-206ENST00000397408 A0A0D9SFI3 127 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 GSG1L2A8MUP6 293 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 CTNND1O60716 968 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 HSPA1AP0DMV8 641 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 HSPA1BP0DMV9 641 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 SDSP20132 328 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 EVX2Q03828 476 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 NMIQ13287 307 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 HELLSQ9NRZ9 838 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 WBP1LQ9NX94 342 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
TSPAN4-206ENST00000397408 PICK1Q9NRD5 415 aa25.4■■□□□ 1.66
TSPAN4-206ENST00000397408 RRP1BQ14684 758 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-206ENST00000397408 AMOTL1Q8IY63 956 aa25.39■■□□□ 1.66
TSPAN4-206ENST00000397408 EPB41L4AQ9HCS5 686 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-206ENST00000397408 DIAPH3Q9NSV4 1193 aa25.39■■□□□ 1.66
TSPAN4-206ENST00000397408 LAMB1P07942 1786 aa25.39■■□□□ 1.65
TSPAN4-206ENST00000397408 CYP2D7A0A087X1C5 515 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 MANSC4A6NHS7 340 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 USP17L12C9JPN9 530 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 USP17L21D6R901 530 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 APPP05067 770 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 SREBF2Q12772 1141 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 PPIL2Q13356 520 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 GIMAP6Q6P9H5 292 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 REM2Q8IYK8 340 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 BEGAINQ9BUH8 593 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 ARPP21Q9UBL0 812 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 ATAD5Q96QE3 1844 aa25.38■■□□□ 1.65
TSPAN4-206ENST00000397408 CAP2P40123 477 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 TDO2P48775 406 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 PPATQ06203 517 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 MCMDC2Q4G0Z9 681 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 CTR9Q6PD62 1173 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 PATL2C9JE40 543 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 HIP1O00291 1037 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 IRF6O14896 467 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 GDF11O95390 407 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 PTPRAP18433 802 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 GABPAQ06546 454 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 C12orf60Q5U649 245 aa25.37■■□□□ 1.65
TSPAN4-206ENST00000397408 CCDC84Q86UT8 332 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-206ENST00000397408 NACAP1Q9BZK3 213 aa25.36■■□□□ 1.65
TSPAN4-206ENST00000397408 SMIM22K7EJ46 135 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 SHMT1P34896 483 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 SHROOM1Q2M3G4 852 aaPredicted RBP25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 TATDN1Q6P1N9 297 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 CWC27Q6UX04 472 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 ZNF589Q86UQ0 364 aaPredicted RBP25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 IFNL3Q8IZI9 196 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 SLC44A5Q8NCS7 719 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 DYNLL2Q96FJ2 89 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 ZHX2Q9Y6X8 837 aa25.35■■□□□ 1.65
TSPAN4-206ENST00000397408 TM4SF4P48230 202 aa25.34■■□□□ 1.65
TSPAN4-206ENST00000397408 GTF2A2P52657 109 aa25.34■■□□□ 1.65
TSPAN4-206ENST00000397408 SBK1Q52WX2 424 aa25.34■■□□□ 1.65
TSPAN4-206ENST00000397408 VPS53Q5VIR6 699 aa25.34■■□□□ 1.65
TSPAN4-206ENST00000397408 MS4A4AQ96JQ5 239 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms