RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
CAPN3-207ENST00000397200 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-207ENST00000397200 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-207ENST00000397200 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
CAPN3-207ENST00000397200 PNMA8AQ86V59 439 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-207ENST00000397200 APOBEC3FQ8IUX4 373 aaKnown RBP17.59■□□□□ 0.41
CAPN3-207ENST00000397200 ZNF526Q8TF50 670 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-207ENST00000397200 RRAGCQ9HB90 399 aa17.59■□□□□ 0.41
CAPN3-207ENST00000397200 GGA3Q9NZ52 723 aa17.59■□□□□ 0.41
CAPN3-207ENST00000397200 CYP46A1Q9Y6A2 500 aa17.59■□□□□ 0.41
CAPN3-207ENST00000397200 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.41
CAPN3-207ENST00000397200 ZNF213O14771 459 aa17.58■□□□□ 0.41
CAPN3-207ENST00000397200 HAND2P61296 217 aa17.58■□□□□ 0.41
CAPN3-207ENST00000397200 SBK1Q52WX2 424 aa17.58■□□□□ 0.41
CAPN3-207ENST00000397200 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.41
CAPN3-207ENST00000397200 FAM83AQ86UY5 434 aa17.58■□□□□ 0.41
CAPN3-207ENST00000397200 FAM151AQ8WW52 585 aa17.58■□□□□ 0.41
CAPN3-207ENST00000397200 CNTNAP1P78357 1384 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 GOLGA6L22H0YM25 854 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 CYP21A2P08686 494 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 PSMA5P28066 241 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 PPARAQ07869 468 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
CAPN3-207ENST00000397200 ZFPM1Q8IX07 1006 aa17.58■□□□□ 0.4
CAPN3-207ENST00000397200 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.4
CAPN3-207ENST00000397200 DHX36Q9H2U1 1008 aaKnown RBP17.58■□□□□ 0.4
CAPN3-207ENST00000397200 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
CAPN3-207ENST00000397200 POLR2AP24928 1970 aaKnown RBP17.57■□□□□ 0.4
CAPN3-207ENST00000397200 CYP2D7A0A087X1C5 515 aa17.57■□□□□ 0.4
CAPN3-207ENST00000397200 HLA-DOAP06340 250 aa17.57■□□□□ 0.4
CAPN3-207ENST00000397200 CYP2D6P10635 497 aa17.57■□□□□ 0.4
CAPN3-207ENST00000397200 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
CAPN3-207ENST00000397200 TTC6Q86TZ1 520 aa17.57■□□□□ 0.4
CAPN3-207ENST00000397200 ZC3H15Q8WU90 426 aaKnown RBP17.57■□□□□ 0.4
CAPN3-207ENST00000397200 DCPSQ96C86 337 aaKnown RBP17.57■□□□□ 0.4
CAPN3-207ENST00000397200 SH2B1Q9NRF2 756 aaPredicted RBP17.57■□□□□ 0.4
CAPN3-207ENST00000397200 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
CAPN3-207ENST00000397200 NOL8Q76FK4 1167 aaKnown RBP17.56■□□□□ 0.4
CAPN3-207ENST00000397200 NMRK2Q9NPI5 230 aa17.56■□□□□ 0.4
CAPN3-207ENST00000397200 ATRNL1Q5VV63 1379 aa17.56■□□□□ 0.4
CAPN3-207ENST00000397200 FSD2A1L4K1 749 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 SLC3A2P08195 630 aaKnown RBP17.55■□□□□ 0.4
CAPN3-207ENST00000397200 CPA1P15085 419 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 PLCD1P51178 756 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 KRT32Q14532 448 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 RASA3Q14644 834 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 TMEM39BQ9GZU3 492 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 ANAPC4Q9UJX5 808 aa17.55■□□□□ 0.4
CAPN3-207ENST00000397200 SCAF8Q9UPN6 1271 aaKnown RBP17.55■□□□□ 0.4
CAPN3-207ENST00000397200 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
CAPN3-207ENST00000397200 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 SH3BP5LQ7L8J4 393 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 DEFB129Q9H1M3 183 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 LARGE1O95461 756 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 KLHL40Q2TBA0 621 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 SULF1Q8IWU6 871 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 STK11IPQ8N1F8 1099 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 PI4KBQ9UBF8 816 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
CAPN3-207ENST00000397200 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
CAPN3-207ENST00000397200 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 SIPA1L1O43166 1804 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 EVX2Q03828 476 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 ANKRD1Q15327 319 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 TBC1D10CQ8IV04 446 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-207ENST00000397200 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 SERPINB13Q9UIV8 391 aa17.53■□□□□ 0.4
CAPN3-207ENST00000397200 ISY1Q9ULR0 285 aaKnown RBP17.53■□□□□ 0.4
CAPN3-207ENST00000397200 MYH8P13535 1937 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 E7EWF7 191 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 SMIM22K7EJ46 135 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 PDE4BQ07343 736 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
CAPN3-207ENST00000397200 STAG1Q8WVM7 1258 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 DYNLL2Q96FJ2 89 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 TRIM34Q9BYJ4 488 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 EHD4Q9H223 541 aa17.52■□□□□ 0.4
CAPN3-207ENST00000397200 TCHHQ07283 1943 aa17.52■□□□□ 0.39
CAPN3-207ENST00000397200 WDR33Q9C0J8 1336 aaKnown RBP17.52■□□□□ 0.39
CAPN3-207ENST00000397200 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
CAPN3-207ENST00000397200 MCTP1Q6DN14 999 aa17.51■□□□□ 0.39
CAPN3-207ENST00000397200 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
CAPN3-207ENST00000397200 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
CAPN3-207ENST00000397200 GPBP1L1Q9HC44 474 aaPredicted RBP17.51■□□□□ 0.39
CAPN3-207ENST00000397200 POTEIP0CG38 1075 aa17.5■□□□□ 0.39
CAPN3-207ENST00000397200 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
CAPN3-207ENST00000397200 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms