RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MAATS1Q7Z4T9 603 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 GPR161Q8N6U8 529 aaKnown RBP17.52■□□□□ 0.4
GNE-202ENST00000396594 MMRN2Q9H8L6 949 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 COMMD10Q9Y6G5 202 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 ABCC3O15438 1527 aa17.52■□□□□ 0.39
GNE-202ENST00000396594 MAP3K15Q6ZN16 1313 aa17.52■□□□□ 0.39
GNE-202ENST00000396594 SLFN12Q8IYM2 578 aa17.52■□□□□ 0.39
GNE-202ENST00000396594 SYCE1Q8N0S2 351 aa17.52■□□□□ 0.39
GNE-202ENST00000396594 BACH1O14867 736 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 GIMAP6Q6P9H5 292 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 FAM81BQ96LP2 452 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
GNE-202ENST00000396594 AKNAD1Q5T1N1 836 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 CUEDC2Q9H467 287 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.51■□□□□ 0.39
GNE-202ENST00000396594 V9GYY5 206 aaPredicted RBP17.51■□□□□ 0.39
GNE-202ENST00000396594 ARHGEF35A5YM69 484 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 F8W031 263 aaPredicted RBP17.51■□□□□ 0.39
GNE-202ENST00000396594 MCM7P33993 719 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 CCDC97Q96F63 343 aaPredicted RBP17.51■□□□□ 0.39
GNE-202ENST00000396594 COPRSQ9NQ92 184 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 PLEKHG2Q9H7P9 1386 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 LARGE2Q8N3Y3 721 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 MIGA1Q8NAN2 632 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 SUCLG2Q96I99 432 aa17.51■□□□□ 0.39
GNE-202ENST00000396594 CYP26C1Q6V0L0 522 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 C16orf45Q96MC5 204 aaPredicted RBP17.5■□□□□ 0.39
GNE-202ENST00000396594 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 PPP1R14CQ8TAE6 165 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 MRPL11Q9Y3B7 192 aaKnown RBP17.5■□□□□ 0.39
GNE-202ENST00000396594 SNX14Q9Y5W7 946 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 HMGB1P1B2RPK0 211 aaPredicted RBP17.5■□□□□ 0.39
GNE-202ENST00000396594 H7C1D1 291 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 DLGAP5Q15398 846 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 DNM3Q9UQ16 869 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 STK10O94804 968 aaKnown RBP17.5■□□□□ 0.39
GNE-202ENST00000396594 PPP2R3AQ06190 1150 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 TSHZ3Q63HK5 1081 aa17.5■□□□□ 0.39
GNE-202ENST00000396594 SOS2Q07890 1332 aaPredicted RBP17.5■□□□□ 0.39
GNE-202ENST00000396594 FAM89AQ96GI7 184 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 DBNDD2Q9BQY9 259 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 AZI2Q9H6S1 392 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 NOLC1Q14978 699 aaKnown RBP eCLIP17.49■□□□□ 0.39
GNE-202ENST00000396594 TMTC1Q8IUR5 882 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 KCNH3Q9ULD8 1083 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 CHD1O14646 1710 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 ANKS4BQ8N8V4 417 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 SLC1A4P43007 532 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 CFAP58Q5T655 872 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
GNE-202ENST00000396594 RLBP1P12271 317 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
GNE-202ENST00000396594 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 UNC13BO14795 1591 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 A0A1W2PRG0 241 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 MARCKSP29966 332 aaPredicted RBP17.48■□□□□ 0.39
GNE-202ENST00000396594 CLCN1P35523 988 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 NLRP12P59046 1061 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 CALCOCO2Q13137 446 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 UBL4BQ8N7F7 174 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 HAUS7Q99871 368 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 RTEL1Q9NZ71 1219 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 PAK1Q13153 545 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.48■□□□□ 0.39
GNE-202ENST00000396594 GPHNQ9NQX3 736 aaPredicted RBP17.48■□□□□ 0.39
GNE-202ENST00000396594 BCRP11274 1271 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 PLS1Q14651 629 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
GNE-202ENST00000396594 ATP6V0A2Q9Y487 856 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 ZNF710Q8N1W2 664 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 JPH2Q9BR39 696 aaPredicted RBP17.48■□□□□ 0.39
GNE-202ENST00000396594 PANK2Q9BZ23 570 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 DNAJC25Q9H1X3 360 aa17.48■□□□□ 0.39
GNE-202ENST00000396594 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
GNE-202ENST00000396594 M0QZ92 97 aa17.47■□□□□ 0.39
GNE-202ENST00000396594 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
GNE-202ENST00000396594 KIF11P52732 1056 aa17.47■□□□□ 0.39
GNE-202ENST00000396594 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
GNE-202ENST00000396594 JARID2Q92833 1246 aaPredicted RBP17.47■□□□□ 0.39
GNE-202ENST00000396594 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
GNE-202ENST00000396594 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
GNE-202ENST00000396594 ACTN4O43707 911 aaKnown RBP17.47■□□□□ 0.39
GNE-202ENST00000396594 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
GNE-202ENST00000396594 FEZ2Q9UHY8 353 aaPredicted RBP17.47■□□□□ 0.39
GNE-202ENST00000396594 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 PDE4DQ08499 809 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 DIS3L2Q8IYB7 885 aaKnown RBP17.46■□□□□ 0.39
GNE-202ENST00000396594 NOC4LQ9BVI4 516 aaKnown RBP17.46■□□□□ 0.39
GNE-202ENST00000396594 ARMT1Q9H993 441 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 XDHP47989 1333 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 B4E1Z4 1266 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms