RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 MROH7-TTC4A0A0A0MT08 1334 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 HMGB1P09429 215 aaKnown RBP10.72□□□□□ -0.69
NDE1-201ENST00000396354 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 FBXO38Q6PIJ6 1188 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 LINC00301Q8NCQ3 95 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 KIAA1468Q9P260 1216 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
NDE1-201ENST00000396354 PRKAB2O43741 272 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 PRDM1O75626 825 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 GRIN1Q05586 938 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
NDE1-201ENST00000396354 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 SMAP1Q8IYB5 467 aaPredicted RBP10.71□□□□□ -0.69
NDE1-201ENST00000396354 NCOA7Q8NI08 942 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 EEF2KMTQ96G04 330 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
NDE1-201ENST00000396354 NEDD4P46934 1319 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 ABCC12Q96J65 1359 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 CDC27P30260 824 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 UBASH3AP57075 661 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 CCZ1BP86790 482 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
NDE1-201ENST00000396354 TRIM29Q14134 588 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 SKIDA1Q1XH10 827 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 ANO1Q5XXA6 986 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 ARMCX5Q6P1M9 558 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 FMR1NBQ8N0W7 255 aaPredicted RBP10.71□□□□□ -0.69
NDE1-201ENST00000396354 AIDAQ96BJ3 306 aa10.71□□□□□ -0.69
NDE1-201ENST00000396354 IFIT3O14879 490 aaKnown RBP10.71□□□□□ -0.7
NDE1-201ENST00000396354 AFMP43652 599 aa10.71□□□□□ -0.7
NDE1-201ENST00000396354 ADKP55263 362 aaKnown RBP10.71□□□□□ -0.7
NDE1-201ENST00000396354 PUM3Q15397 648 aaKnown RBP10.71□□□□□ -0.7
NDE1-201ENST00000396354 ERFEQ4G0M1 354 aa10.71□□□□□ -0.7
NDE1-201ENST00000396354 TMEM67Q5HYA8 995 aa10.71□□□□□ -0.7
NDE1-201ENST00000396354 NAA16Q6N069 864 aaPredicted RBP10.71□□□□□ -0.7
NDE1-201ENST00000396354 FBXO18Q8NFZ0 1043 aa10.71□□□□□ -0.7
NDE1-201ENST00000396354 ARMT1Q9H993 441 aa10.71□□□□□ -0.7
NDE1-201ENST00000396354 FANCLQ9NW38 375 aa10.71□□□□□ -0.7
NDE1-201ENST00000396354 GOLGA8AA7E2F4 631 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 KLRK1P26718 216 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
NDE1-201ENST00000396354 KRT40Q6A162 431 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 BTBD18B2RXH4 712 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 GUCY1A2P33402 732 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 FANCCQ00597 558 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 EVX2Q03828 476 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 NBPF11Q86T75 865 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 LPIN2Q92539 896 aa10.7□□□□□ -0.7
NDE1-201ENST00000396354 ZNF512BQ96KM6 892 aaPredicted RBP10.7□□□□□ -0.7
NDE1-201ENST00000396354 SRP68Q9UHB9 627 aaKnown RBP10.7□□□□□ -0.7
NDE1-201ENST00000396354 SEC31AO94979 1220 aaKnown RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
NDE1-201ENST00000396354 EVCP57679 992 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 TPM4P67936 248 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 NR5A1Q13285 461 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 ARHGAP29Q52LW3 1261 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 E4F1Q66K89 784 aaPredicted RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 POTEAQ6S8J7 498 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 SMYD4Q8IYR2 804 aaPredicted RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 MAGEB6Q8N7X4 407 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 SPATA5Q8NB90 893 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 ENGASEQ8NFI3 743 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 CCDC34Q96HJ3 373 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 UTRNP46939 3433 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 IARSP41252 1262 aaKnown RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 TDO2P48775 406 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 DMTNQ08495 405 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 LONRF3Q496Y0 759 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 ADALQ6DHV7 355 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 MNS1Q8NEH6 495 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 STRBPQ96SI9 672 aaKnown RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 CTAGE5O15320 804 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 ZFYP08048 801 aaPredicted RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 CHRNDQ07001 517 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 CHD4Q14839 1912 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 TEX35Q5T0J7 233 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 BRWD3Q6RI45 1802 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 USP49Q70CQ1 688 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 PPP1R13BQ96KQ4 1090 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
NDE1-201ENST00000396354 MAPK8IP1Q9UQF2 711 aa10.69□□□□□ -0.7
NDE1-201ENST00000396354 BTAF1O14981 1849 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 DHX16O60231 1041 aaKnown RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 MBD4O95243 580 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 RBM6P78332 1123 aaKnown RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 KIF23Q02241 960 aaPredicted RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 LCORLQ8N3X6 602 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 ZNF384Q8TF68 577 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 NAPBQ9H115 298 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 LZTFL1Q9NQ48 299 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 CTNNA3Q9UI47 895 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 PAXBP1Q9Y5B6 917 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 POLR2DO15514 142 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms