RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SLC4A4Q9Y6R1 1079 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 GJA5P36382 358 aa19.91■□□□□ 0.78
CXCL1-201ENST00000395761 EVX2Q03828 476 aa19.91■□□□□ 0.78
CXCL1-201ENST00000395761 WNK4Q96J92 1243 aa19.91■□□□□ 0.78
CXCL1-201ENST00000395761 OTOFQ9HC10 1997 aa19.91■□□□□ 0.78
CXCL1-201ENST00000395761 GPAA1O43292 621 aa19.9■□□□□ 0.78
CXCL1-201ENST00000395761 GSPT1P15170 499 aaKnown RBP19.9■□□□□ 0.78
CXCL1-201ENST00000395761 RRP1BQ14684 758 aaKnown RBP19.9■□□□□ 0.78
CXCL1-201ENST00000395761 TTC22Q5TAA0 569 aa19.9■□□□□ 0.78
CXCL1-201ENST00000395761 METTL16Q86W50 562 aaKnown RBP19.9■□□□□ 0.78
CXCL1-201ENST00000395761 FOXP4Q8IVH2 680 aaPredicted RBP19.9■□□□□ 0.78
CXCL1-201ENST00000395761 DNAJC18Q9H819 358 aa19.9■□□□□ 0.78
CXCL1-201ENST00000395761 MCM9Q9NXL9 1143 aa19.9■□□□□ 0.78
CXCL1-201ENST00000395761 POLR3DP05423 398 aaPredicted RBP19.89■□□□□ 0.77
CXCL1-201ENST00000395761 CYP2D6P10635 497 aa19.89■□□□□ 0.77
CXCL1-201ENST00000395761 PLCD1P51178 756 aa19.89■□□□□ 0.77
CXCL1-201ENST00000395761 OPTNQ96CV9 577 aa19.89■□□□□ 0.77
CXCL1-201ENST00000395761 FAM227BQ96M60 508 aa19.89■□□□□ 0.77
CXCL1-201ENST00000395761 ATP8A2Q9NTI2 1148 aa19.89■□□□□ 0.77
CXCL1-201ENST00000395761 SIPA1L1O43166 1804 aa19.88■□□□□ 0.77
CXCL1-201ENST00000395761 THSD7BQ9C0I4 1608 aa19.88■□□□□ 0.77
CXCL1-201ENST00000395761 GSG1L2A8MUP6 293 aa19.88■□□□□ 0.77
CXCL1-201ENST00000395761 HLA-DOAP06340 250 aa19.88■□□□□ 0.77
CXCL1-201ENST00000395761 CCDC129Q6ZRS4 1044 aa19.88■□□□□ 0.77
CXCL1-201ENST00000395761 CRACR2BQ8N4Y2 399 aaPredicted RBP19.88■□□□□ 0.77
CXCL1-201ENST00000395761 HERC5Q9UII4 1024 aaKnown RBP19.88■□□□□ 0.77
CXCL1-201ENST00000395761 CYP2D7A0A087X1C5 515 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 A0A0D9SFI3 127 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 SMIM22K7EJ46 135 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 SDSP20132 328 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 NMIQ13287 307 aaPredicted RBP19.87■□□□□ 0.77
CXCL1-201ENST00000395761 NOL9Q5SY16 702 aaKnown RBP19.87■□□□□ 0.77
CXCL1-201ENST00000395761 TTC6Q86TZ1 520 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 OTUD5Q96G74 571 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 WBP1LQ9NX94 342 aa19.87■□□□□ 0.77
CXCL1-201ENST00000395761 MYH1P12882 1939 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 SPDYE5A6NIY4 337 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 USP17L12C9JPN9 530 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 USP17L21D6R901 530 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 CTNND1O60716 968 aaKnown RBP19.86■□□□□ 0.77
CXCL1-201ENST00000395761 JAG1P78504 1218 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 TICAM2Q86XR7 235 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 ERO1BQ86YB8 467 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 SCYL3Q8IZE3 742 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 TRIM34Q9BYJ4 488 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 EHD4Q9H223 541 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 HELLSQ9NRZ9 838 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.86■□□□□ 0.77
CXCL1-201ENST00000395761 SERPINB13Q9UIV8 391 aa19.86■□□□□ 0.77
CXCL1-201ENST00000395761 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
CXCL1-201ENST00000395761 PCNTO95613 3336 aa19.85■□□□□ 0.77
CXCL1-201ENST00000395761 PATL2C9JE40 543 aaKnown RBP19.85■□□□□ 0.77
CXCL1-201ENST00000395761 ZBTB48P10074 688 aaPredicted RBP19.85■□□□□ 0.77
CXCL1-201ENST00000395761 MAP2K1Q02750 393 aaPredicted RBP19.85■□□□□ 0.77
CXCL1-201ENST00000395761 CTR9Q6PD62 1173 aa19.85■□□□□ 0.77
CXCL1-201ENST00000395761 EPB41L4AQ9HCS5 686 aaPredicted RBP19.85■□□□□ 0.77
CXCL1-201ENST00000395761 NAV1Q8NEY1 1877 aa19.85■□□□□ 0.77
CXCL1-201ENST00000395761 APPP05067 770 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 HSPA1AP0DMV8 641 aaKnown RBP19.84■□□□□ 0.77
CXCL1-201ENST00000395761 HSPA1BP0DMV9 641 aaKnown RBP19.84■□□□□ 0.77
CXCL1-201ENST00000395761 PTPRAP18433 802 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 GNAT2P19087 354 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 CAP2P40123 477 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 SHROOM1Q2M3G4 852 aaPredicted RBP19.84■□□□□ 0.77
CXCL1-201ENST00000395761 MCMDC2Q4G0Z9 681 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 C12orf60Q5U649 245 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 CCDC84Q86UT8 332 aaPredicted RBP19.84■□□□□ 0.77
CXCL1-201ENST00000395761 DYNLL2Q96FJ2 89 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 PICK1Q9NRD5 415 aa19.84■□□□□ 0.77
CXCL1-201ENST00000395761 IRF6O14896 467 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 FOXP2O15409 715 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 TM4SF4P48230 202 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 PPATQ06203 517 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 GABPAQ06546 454 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 VPS53Q5VIR6 699 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 TATDN1Q6P1N9 297 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 GIMAP6Q6P9H5 292 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 ZNF589Q86UQ0 364 aaPredicted RBP19.83■□□□□ 0.77
CXCL1-201ENST00000395761 IFNL3Q8IZI9 196 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 MS4A4AQ96JQ5 239 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 ZHX2Q9Y6X8 837 aa19.83■□□□□ 0.77
CXCL1-201ENST00000395761 MANSC4A6NHS7 340 aaPredicted RBP19.82■□□□□ 0.76
CXCL1-201ENST00000395761 GDF11O95390 407 aa19.82■□□□□ 0.76
CXCL1-201ENST00000395761 SHMT1P34896 483 aa19.82■□□□□ 0.76
CXCL1-201ENST00000395761 PPIL2Q13356 520 aa19.82■□□□□ 0.76
CXCL1-201ENST00000395761 CWC27Q6UX04 472 aaKnown RBP19.82■□□□□ 0.76
CXCL1-201ENST00000395761 SLC44A5Q8NCS7 719 aa19.82■□□□□ 0.76
CXCL1-201ENST00000395761 BAZ2AQ9UIF9 1905 aaKnown RBP19.82■□□□□ 0.76
CXCL1-201ENST00000395761 TDO2P48775 406 aa19.81■□□□□ 0.76
CXCL1-201ENST00000395761 REM2Q8IYK8 340 aaPredicted RBP19.81■□□□□ 0.76
CXCL1-201ENST00000395761 DIAPH3Q9NSV4 1193 aa19.81■□□□□ 0.76
CXCL1-201ENST00000395761 RNF186Q9NXI6 227 aa19.81■□□□□ 0.76
CXCL1-201ENST00000395761 MINDY4BA8MYZ0 360 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 FOXN1O15353 648 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 GTF2A2P52657 109 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 SREBF2Q12772 1141 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 SBK1Q52WX2 424 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 AMOTL1Q8IY63 956 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 PTPN18Q99952 460 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms