RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 HTRA3P83110 453 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 EXOSC9Q06265 439 aaKnown RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 USP4Q13107 963 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 GCKRQ14397 625 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 EAPPQ56P03 285 aaPredicted RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 G2E3Q7L622 706 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 TTLL11Q8NHH1 800 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 ZNF428Q96B54 188 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 BSDC1Q9NW68 430 aaPredicted RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 POLLQ9UGP5 575 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 NSFL1CQ9UNZ2 370 aaKnown RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 MAFBQ9Y5Q3 323 aaPredicted RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 GJA3Q9Y6H8 435 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 MED23Q9ULK4 1368 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 CEP350Q5VT06 3117 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 A0A1B0GUL6 1792 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 TRPM7Q96QT4 1865 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 USP17L3A6NCW0 530 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 USP17L4A6NCW7 530 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 CSF1RP07333 972 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 BMP1P13497 986 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 EPS15P42566 896 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 GMPSP49915 693 aaPredicted RBP7.79□□□□□ -1.16
PTPN20-208ENST00000395727 FKBP5Q13451 457 aaPredicted RBP7.79□□□□□ -1.16
PTPN20-208ENST00000395727 NCOA4Q13772 614 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 CWF19L2Q2TBE0 894 aaKnown RBP7.79□□□□□ -1.16
PTPN20-208ENST00000395727 OXLD1Q5BKU9 147 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 ANKRD18AQ8IVF6 992 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 SEC31BQ9NQW1 1179 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 GGA1Q9UJY5 639 aa7.79□□□□□ -1.16
PTPN20-208ENST00000395727 ECE2O60344 883 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 MYCP01106 439 aaPredicted RBP7.78□□□□□ -1.16
PTPN20-208ENST00000395727 VIL1P09327 827 aaKnown RBP7.78□□□□□ -1.16
PTPN20-208ENST00000395727 ATP2B4P23634 1241 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 MMP14P50281 582 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 EML3Q32P44 896 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 BEND3Q5T5X7 828 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 MAP1SQ66K74 1059 aaPredicted RBP7.78□□□□□ -1.16
PTPN20-208ENST00000395727 UBE3BQ7Z3V4 1068 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 PODNQ7Z5L7 613 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 FAM9BQ8IZU0 186 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 HHIPL1Q96JK4 782 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 AGBL1Q96MI9 1066 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
PTPN20-208ENST00000395727 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
PTPN20-208ENST00000395727 GREM2Q9H772 168 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 SPEF2Q9C093 1822 aa7.78□□□□□ -1.16
PTPN20-208ENST00000395727 SCN9AQ15858 1988 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 E9PSI1 815 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 H7C1D1 291 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 CCER2I3L3R5 266 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 PSMD14O00487 310 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 ALDH1L1O75891 902 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 RAD17O75943 681 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 UFL1O94874 794 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 AGBL3Q8NEM8 1001 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 BCL2L13Q9BXK5 485 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 ANKIB1Q9P2G1 1089 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 CNOT7Q9UIV1 285 aaKnown RBP7.77□□□□□ -1.17
PTPN20-208ENST00000395727 LEMD3Q9Y2U8 911 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 UTYO14607 1347 aa7.77□□□□□ -1.17
PTPN20-208ENST00000395727 CT47B1P0C2W7 299 aaPredicted RBP7.76□□□□□ -1.17
PTPN20-208ENST00000395727 ITGA6P23229 1130 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 PTGIRP43119 386 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 CCT4P50991 539 aaKnown RBP7.76□□□□□ -1.17
PTPN20-208ENST00000395727 ZNF280AP59817 542 aaPredicted RBP7.76□□□□□ -1.17
PTPN20-208ENST00000395727 RELBQ01201 579 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 C15orf52Q6ZUT6 534 aaKnown RBP7.76□□□□□ -1.17
PTPN20-208ENST00000395727 CYP2U1Q7Z449 544 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 GMLQ99445 158 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 ANKRD2Q9GZV1 360 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 MINPP1Q9UNW1 487 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 PTPRCP08575 1304 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 MYO3BQ8WXR4 1341 aa7.76□□□□□ -1.17
PTPN20-208ENST00000395727 GRM8O00222 908 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 SPINT1O43278 529 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 HSPA1AP0DMV8 641 aaKnown RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 HSPA1BP0DMV9 641 aaKnown RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 IGHMBP2P38935 993 aaKnown RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 HIRAP54198 1017 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 FOXO4P98177 505 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 SLFN5Q08AF3 891 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 ALDH1L2Q3SY69 923 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 CDC37L1Q7L3B6 337 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 TRMT2AQ8IZ69 625 aaKnown RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 CCDC82Q8N4S0 544 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 TRPM4Q8TD43 1214 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 JARID2Q92833 1246 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 CCDC97Q96F63 343 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms