RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 PPIL2Q13356 520 aa16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 UBE3CQ15386 1083 aa16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 ANKRD45Q5TZF3 282 aa16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 ZNF296Q8WUU4 475 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 PI4KBQ9UBF8 816 aa16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 HERC5Q9UII4 1024 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 ERC2O15083 957 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 CTNND1O60716 968 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 IGHDP01880 384 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 GTF2A2P52657 109 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 NOM1Q5C9Z4 860 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 IFNL1Q8IU54 200 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 SCYL3Q8IZE3 742 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 STAP2Q9UGK3 403 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 HTTP42858 3142 aa16.16■□□□□ 0.18
HLA-DMA-202ENST00000395303 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 ALDH1A1P00352 501 aa16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 MX1P20591 662 aa16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
HLA-DMA-202ENST00000395303 LOC285556D6RIA3 1793 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 GPR25O00155 361 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 IRF6O14896 467 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 USP5P45974 858 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 ZSCAN25Q6NSZ9 544 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 BRI3BPQ8WY22 251 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 PTPN18Q99952 460 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 R3HDMLQ9H3Y0 253 aa16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
HLA-DMA-202ENST00000395303 PTPRAP18433 802 aa16.13■□□□□ 0.17
HLA-DMA-202ENST00000395303 SLFNL1Q499Z3 407 aa16.13■□□□□ 0.17
HLA-DMA-202ENST00000395303 LCORLQ8N3X6 602 aa16.13■□□□□ 0.17
HLA-DMA-202ENST00000395303 EHD4Q9H223 541 aa16.13■□□□□ 0.17
HLA-DMA-202ENST00000395303 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
HLA-DMA-202ENST00000395303 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
HLA-DMA-202ENST00000395303 FAM196BA6NMK8 535 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 CHGBP05060 677 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 CETPP11597 493 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 PDE1AP54750 535 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 NUCB1Q02818 461 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 SNAPC2Q13487 334 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 RRP1BQ14684 758 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 PKN2Q16513 984 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 ZCCHC17Q9NP64 241 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-202ENST00000395303 CCL15-CCL14A0A0B4J2E2 113 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 CXCL11O14625 94 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 MBD4O95243 580 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 HLA-DOAP06340 250 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 ZFYP08048 801 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 CAP2P40123 477 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 CCL15Q16663 113 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 LNPKQ9C0E8 428 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 GINM1Q9NU53 330 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 SAP30BPQ9UHR5 308 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 AFG3L2Q9Y4W6 797 aa16.11■□□□□ 0.17
HLA-DMA-202ENST00000395303 RNF113AO15541 343 aaKnown RBP16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 IRX6P78412 446 aaPredicted RBP16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 MOGSQ13724 837 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 TTC6Q86TZ1 520 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 APPBP2Q92624 585 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 PICK1Q9NRD5 415 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 ATP8A2Q9NTI2 1148 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 MGAMO43451 1857 aa16.1■□□□□ 0.17
HLA-DMA-202ENST00000395303 GABPAQ06546 454 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 FBXO46Q6PJ61 603 aaPredicted RBP16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 TICAM2Q86XR7 235 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 OSBP2Q969R2 916 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
HLA-DMA-202ENST00000395303 GREB1LQ9C091 1923 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 A0A0G2JLL6 359 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 BTBD19C9JJ37 291 aa16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 FKTNO75072 461 aa16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 PLCD1P51178 756 aa16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 PRRT2Q7Z6L0 340 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms