RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 NBPF20Q3BBV1 942 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 CDV3Q9UKY7 258 aaKnown RBP13.79□□□□□ -0.2
RTN1-203ENST00000395090 PHKA1P46020 1223 aa13.78□□□□□ -0.2
RTN1-203ENST00000395090 STYK1Q6J9G0 422 aa13.78□□□□□ -0.2
RTN1-203ENST00000395090 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
RTN1-203ENST00000395090 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
RTN1-203ENST00000395090 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
RTN1-203ENST00000395090 SPEF2Q9C093 1822 aa13.78□□□□□ -0.2
RTN1-203ENST00000395090 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.2
RTN1-203ENST00000395090 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.2
RTN1-203ENST00000395090 USP17L5A8MUK1 530 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 H0YIN7 160 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 HIP1O00291 1037 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 MCAMP43121 646 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 SCARF1Q14162 830 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
RTN1-203ENST00000395090 FBXO33Q7Z6M2 555 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 KBTBD3Q8NAB2 608 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.21
RTN1-203ENST00000395090 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
RTN1-203ENST00000395090 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.21
RTN1-203ENST00000395090 XDHP47989 1333 aa13.76□□□□□ -0.21
RTN1-203ENST00000395090 C2CD5Q86YS7 1000 aa13.76□□□□□ -0.21
RTN1-203ENST00000395090 EDC3Q96F86 508 aaKnown RBP13.76□□□□□ -0.21
RTN1-203ENST00000395090 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
RTN1-203ENST00000395090 ARAP2Q8WZ64 1704 aa13.76□□□□□ -0.21
RTN1-203ENST00000395090 RFX7Q2KHR2 1363 aa13.76□□□□□ -0.21
RTN1-203ENST00000395090 A0A1B0GUL6 1792 aa13.76□□□□□ -0.21
RTN1-203ENST00000395090 USP17L3A6NCW0 530 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 USP17L4A6NCW7 530 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 SLC19A1P41440 591 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
RTN1-203ENST00000395090 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
RTN1-203ENST00000395090 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 USP17L1Q7RTZ2 530 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 PLPP7Q8NBV4 271 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
RTN1-203ENST00000395090 ANKIB1Q9P2G1 1089 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 GOLIM4O00461 696 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 REC8O95072 547 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 ZBTB7AO95365 584 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 GPSM2P81274 684 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
RTN1-203ENST00000395090 CAVIN4Q5BKX8 364 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 TBC1D32Q96NH3 1257 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 USP26Q9BXU7 913 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 C10orf71Q711Q0 1435 aa13.75□□□□□ -0.21
RTN1-203ENST00000395090 AKAP11Q9UKA4 1901 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 SGSM2O43147 1006 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
RTN1-203ENST00000395090 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 ZAP70P43403 619 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 GYG1P46976 350 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 KCNJ4P48050 445 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 MAP7D1Q3KQU3 841 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 RUFY2Q8WXA3 655 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 ANTXR1Q9H6X2 564 aa13.74□□□□□ -0.21
RTN1-203ENST00000395090 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
RTN1-203ENST00000395090 NSFL1CQ9UNZ2 370 aaKnown RBP13.74□□□□□ -0.21
RTN1-203ENST00000395090 CYP2E1P05181 493 aaPredicted RBP13.73□□□□□ -0.21
RTN1-203ENST00000395090 KLRK1P26718 216 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 CHRNA5P30532 468 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 RBM25P49756 843 aaKnown RBP13.73□□□□□ -0.21
RTN1-203ENST00000395090 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
RTN1-203ENST00000395090 PI16Q6UXB8 463 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 SLC51AQ86UW1 340 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 TXNRD3Q86VQ6 643 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 DEPDC4Q8N2C3 294 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 C22orf23Q9BZE7 217 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 IL25Q9H293 177 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 DIAPH3Q9NSV4 1193 aa13.73□□□□□ -0.21
RTN1-203ENST00000395090 AK9Q5TCS8 1911 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 KCNA3P22001 575 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 POLD1P28340 1107 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
RTN1-203ENST00000395090 CWC27Q6UX04 472 aaKnown RBP13.72□□□□□ -0.21
RTN1-203ENST00000395090 ZNF622Q969S3 477 aaKnown RBP eCLIP13.72□□□□□ -0.21
RTN1-203ENST00000395090 GGA1Q9UJY5 639 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 MAP4K5Q9Y4K4 846 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 COL11A2P13942 1736 aaPredicted RBP13.72□□□□□ -0.21
RTN1-203ENST00000395090 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
RTN1-203ENST00000395090 LRRC37AA6NMS7 1700 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 ESPNB1AK53 854 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 LZTS3O60299 673 aaPredicted RBP13.72□□□□□ -0.21
RTN1-203ENST00000395090 TGFB2P61812 414 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 LRRFIP1Q32MZ4 808 aaKnown RBP13.72□□□□□ -0.21
RTN1-203ENST00000395090 ILDR2Q71H61 639 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms