RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ZNF446Q9NWS9 450 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 FHOD1Q9Y613 1164 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 SEMA3EO15041 775 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 ZRANB2O95218 330 aaKnown RBP eCLIP11.48□□□□□ -0.571e-7■■□□□ 13.8
UBE2D3-208ENST00000394803 PDE8BO95263 885 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 CCDC175P0C221 793 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 PLCD1P51178 756 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 PUM3Q15397 648 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 RTN1Q16799 776 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 LPIN2Q92539 896 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 GOLGA1Q92805 767 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 STRBPQ96SI9 672 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 CARD10Q9BWT7 1032 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 RAI14Q9P0K7 980 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 MAN1B1Q9UKM7 699 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 PARP3Q9Y6F1 533 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 TUBBP07437 444 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 SLC5A1P13866 664 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 ZNF18P17022 549 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 CDC27P30260 824 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 GNG11P61952 73 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 MORC3Q14149 939 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 RAB11FIP4Q86YS3 637 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 PDILTQ8N807 584 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 PHKBQ93100 1093 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 CCDC51Q96ER9 411 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 CARD6Q9BX69 1037 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 PRDM11Q9NQV5 511 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 NFE2L3Q9Y4A8 694 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 SRPRBQ9Y5M8 271 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 VWA3AA6NCI4 1184 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 NPHP1O15259 732 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 PDE8AO60658 829 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 AKAP17AQ02040 695 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 PPP2R3AQ06190 1150 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 WTAPQ15007 396 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 DIS3L2Q8IYB7 885 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 DPF2Q92785 391 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 ARFGAP3Q9NP61 516 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 GJB4Q9NTQ9 266 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 FBXO2Q9UK22 296 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 MRFAP1Q9Y605 127 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 DOCK2Q92608 1830 aa11.47□□□□□ -0.57
UBE2D3-208ENST00000394803 AKR1B15C9JRZ8 316 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 RANBP6O60518 1105 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 TMEM139Q8IV31 216 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 IFNL3Q8IZI9 196 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 CEP112Q8N8E3 955 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 CABLES1Q8TDN4 633 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 STAG1Q8WVM7 1258 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 AIFM3Q96NN9 605 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 CLIC6Q96NY7 704 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 TSPYL1Q9H0U9 437 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
UBE2D3-208ENST00000394803 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.58
UBE2D3-208ENST00000394803 LRP5O75197 1615 aa11.46□□□□□ -0.58
UBE2D3-208ENST00000394803 TCRBV5S4A2TA0A5A2 114 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 CYP2C19P33261 490 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 BRD3Q15059 726 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 VGLL2Q8N8G2 317 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 TC2NQ8N9U0 490 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 PIH1D3Q9NQM4 214 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 PNPLA7Q6ZV29 1317 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 SHANK3Q9BYB0 1731 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 POLR2DO15514 142 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 KIF5CO60282 957 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 ERLIN1O75477 346 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 ANKRD20A12PQ8NF67 263 aa11.45□□□□□ -0.58
UBE2D3-208ENST00000394803 AATFQ9NY61 560 aaKnown RBP eCLIP11.45□□□□□ -0.586e-12■■□□□ 12.2
UBE2D3-208ENST00000394803 CCDC151A5D8V7 595 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 IGSF3O75054 1194 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 SPAG1Q07617 926 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 TRIM14Q14142 442 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 NR1I3Q14994 352 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 SPATA1Q5VX52 437 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 PI16Q6UXB8 463 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms