RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 LONRF3Q496Y0 759 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 FOXP4Q8IVH2 680 aaPredicted RBP21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 VGLL2Q8N8G2 317 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 TTLL11Q8NHH1 800 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 TMEM87BQ96K49 555 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 TMX1Q9H3N1 280 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 TMEM232C9JQI7 657 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 UBE2Q2LH0YL09 131 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 CUTAO60888 179 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 H2AFXP16104 143 aaPredicted RBP21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 IARSP41252 1262 aaKnown RBP21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 ETF1P62495 437 aaKnown RBP21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 TTF1Q15361 905 aaPredicted RBP21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 MYL10Q9BUA6 226 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 LY9Q9HBG7 655 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 CDHR2Q9BYE9 1310 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 BCORQ6W2J9 1755 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 CFAP100Q494V2 611 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 KRBA2Q6ZNG9 492 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 HOMER1Q86YM7 354 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 VSTM4Q8IW00 320 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 WWC3Q9ULE0 1092 aa21.1■□□□□ 0.97
PCDHA1-202ENST00000394633 GOLGA8AA7E2F4 631 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 PDE6AP16499 860 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 ZNF771Q7L3S4 317 aaPredicted RBP21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 PHLPP2Q6ZVD8 1323 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 TCRBV5S4A2TA0A5A2 114 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 CCP110O43303 1012 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 GOLGA8FQ08AF8 430 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 GOLGA8DPQ0D2H9 430 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 TRIM29Q14134 588 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 PTPN21Q16825 1174 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 TRIM65Q6PJ69 517 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 OLFM4Q6UX06 510 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 NFXL1Q6ZNB6 911 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 SGMS1Q86VZ5 419 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 CNNM1Q9NRU3 951 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 FANCLQ9NW38 375 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 DNAI1Q9UI46 699 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 KCNH3Q9ULD8 1083 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 PCDHA5Q9Y5H7 936 aa21.09■□□□□ 0.97
PCDHA1-202ENST00000394633 GNPATO15228 680 aa21.08■□□□□ 0.97
PCDHA1-202ENST00000394633 PHKA1P46020 1223 aa21.08■□□□□ 0.97
PCDHA1-202ENST00000394633 PDE4BQ07343 736 aa21.08■□□□□ 0.97
PCDHA1-202ENST00000394633 CCDC102BQ68D86 513 aa21.08■□□□□ 0.97
PCDHA1-202ENST00000394633 POTEAQ6S8J7 498 aa21.08■□□□□ 0.97
PCDHA1-202ENST00000394633 ZNF34Q8IZ26 560 aa21.08■□□□□ 0.97
PCDHA1-202ENST00000394633 DOCK2Q92608 1830 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 FOXN1O15353 648 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 BMP6P22004 513 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 RXRBP28702 533 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 TMEM67Q5HYA8 995 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 REXO1L1PQ8IX06 675 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 CNNM3Q8NE01 707 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 STRBPQ96SI9 672 aaKnown RBP21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 INTS13Q9NVM9 706 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 ARAP2Q8WZ64 1704 aa21.08■□□□□ 0.96
PCDHA1-202ENST00000394633 ANKRD18BA2A2Z9 1011 aa21.07■□□□□ 0.96
PCDHA1-202ENST00000394633 FANCGO15287 622 aa21.07■□□□□ 0.96
PCDHA1-202ENST00000394633 CTSWP56202 376 aa21.07■□□□□ 0.96
PCDHA1-202ENST00000394633 SLC26A6Q9BXS9 759 aa21.07■□□□□ 0.96
PCDHA1-202ENST00000394633 STK36Q9NRP7 1315 aa21.07■□□□□ 0.96
PCDHA1-202ENST00000394633 MYO1BO43795 1136 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 TOP1P11387 765 aaKnown RBP21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 TACC3Q9Y6A5 838 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 ARID4AP29374 1257 aaPredicted RBP21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 MDM2Q00987 491 aaPredicted RBP21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 SSRP1Q08945 709 aaKnown RBP21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 TERF2Q15554 542 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 ALX1Q15699 326 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 TMEM139Q8IV31 216 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 STK11IPQ8N1F8 1099 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 TIAM2Q8IVF5 1701 aa21.06■□□□□ 0.96
PCDHA1-202ENST00000394633 PDE8BO95263 885 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 LIFRP42702 1097 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 SPECC1Q5M775 1068 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 KRI1Q8N9T8 703 aaKnown RBP21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 EPB41L4AQ9HCS5 686 aaPredicted RBP21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 ZSWIM5Q9P217 1185 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 FMNL1O95466 1100 aaPredicted RBP21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 CLCN6P51797 869 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 RC3H1Q5TC82 1133 aaKnown RBP21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 AIDAQ96BJ3 306 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
PCDHA1-202ENST00000394633 TOB1P50616 345 aaPredicted RBP21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 ARHGAP29Q52LW3 1261 aa21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 SUSD4Q5VX71 490 aa21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 FCHSD1Q86WN1 690 aa21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 NOSTRINQ8IVI9 506 aa21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 SRP68Q9UHB9 627 aaKnown RBP21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 IFIT3O14879 490 aaKnown RBP21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 GUCY1A2P33402 732 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms