RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 WTIPA6NIX2 430 aaPredicted RBP17.89■□□□□ 0.46
PTBP1-204ENST00000394601 ST5P78524 1137 aa17.89■□□□□ 0.46
PTBP1-204ENST00000394601 CCZ1BP86790 482 aa17.89■□□□□ 0.46
PTBP1-204ENST00000394601 CCZ1P86791 482 aaPredicted RBP17.89■□□□□ 0.46
PTBP1-204ENST00000394601 SF3A1Q15459 793 aaKnown RBP17.89■□□□□ 0.46
PTBP1-204ENST00000394601 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.46
PTBP1-204ENST00000394601 DLEC1Q9Y238 1755 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 GUCY1A2P33402 732 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 TRDNQ13061 729 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 APPP05067 770 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 SLC5A1P13866 664 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 STAG1Q8WVM7 1258 aa17.89■□□□□ 0.45
PTBP1-204ENST00000394601 UTP14AQ9BVJ6 771 aaKnown RBP17.89■□□□□ 0.45
PTBP1-204ENST00000394601 STK36Q9NRP7 1315 aa17.88■□□□□ 0.45
PTBP1-204ENST00000394601 PPP6R2O75170 966 aa17.88■□□□□ 0.45
PTBP1-204ENST00000394601 SHISA4Q96DD7 197 aa17.88■□□□□ 0.45
PTBP1-204ENST00000394601 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
PTBP1-204ENST00000394601 SMIM22K7EJ46 135 aa17.88■□□□□ 0.45
PTBP1-204ENST00000394601 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTBP1-204ENST00000394601 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.88■□□□□ 0.45
PTBP1-204ENST00000394601 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
PTBP1-204ENST00000394601 ZBTB43O43298 467 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 SMC2O95347 1197 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 MARCKSP29966 332 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-204ENST00000394601 LMAN1P49257 510 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 AKNAD1Q5T1N1 836 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 SLU7O95391 586 aaKnown RBP17.87■□□□□ 0.45
PTBP1-204ENST00000394601 TOB1P50616 345 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-204ENST00000394601 C3orf67Q6ZVT6 689 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 ZNF446Q9NWS9 450 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-204ENST00000394601 LOC102724428A0A0B4J2F2 783 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 FMNL1O95466 1100 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-204ENST00000394601 SIK1P57059 783 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 CEP57L1Q8IYX8 460 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 KCND1Q9NSA2 647 aa17.87■□□□□ 0.45
PTBP1-204ENST00000394601 URI1O94763 535 aaPredicted RBP17.86■□□□□ 0.45
PTBP1-204ENST00000394601 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 RESP18Q5W5W9 173 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 MNS1Q8NEH6 495 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 ATP6V1AP38606 617 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 NLRP12P59046 1061 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 CHRNDQ07001 517 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 ZNF384Q8TF68 577 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 SDF4Q9BRK5 362 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 OSBPL5Q9H0X9 879 aaPredicted RBP17.86■□□□□ 0.45
PTBP1-204ENST00000394601 MYH6P13533 1939 aa17.86■□□□□ 0.45
PTBP1-204ENST00000394601 BAZ2AQ9UIF9 1905 aaKnown RBP17.86■□□□□ 0.45
PTBP1-204ENST00000394601 CDKL5O76039 1030 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 IFNAR1P17181 557 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 TEX35Q5T0J7 233 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 FOXP4Q8IVH2 680 aaPredicted RBP17.85■□□□□ 0.45
PTBP1-204ENST00000394601 BIN1O00499 593 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 CLCN6P51797 869 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 BMS1Q14692 1282 aaKnown RBP17.85■□□□□ 0.45
PTBP1-204ENST00000394601 HSP90AA4PQ58FG1 418 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 DNAI1Q9UI46 699 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 LCMT1Q9UIC8 334 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 MDM2Q00987 491 aaPredicted RBP17.85■□□□□ 0.45
PTBP1-204ENST00000394601 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 STK11IPQ8N1F8 1099 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 UBXN4Q92575 508 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 ACSBG1Q96GR2 724 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 CLIC6Q96NY7 704 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 NAPBQ9H115 298 aa17.85■□□□□ 0.45
PTBP1-204ENST00000394601 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
PTBP1-204ENST00000394601 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
PTBP1-204ENST00000394601 MPHOSPH8Q99549 860 aa17.84■□□□□ 0.45
PTBP1-204ENST00000394601 THRAP3Q9Y2W1 955 aaKnown RBP17.84■□□□□ 0.45
PTBP1-204ENST00000394601 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.45
PTBP1-204ENST00000394601 IARSP41252 1262 aaKnown RBP17.83■□□□□ 0.45
PTBP1-204ENST00000394601 ZRSR1Q15695 479 aaKnown RBP17.83■□□□□ 0.45
PTBP1-204ENST00000394601 CCDC152Q4G0S7 254 aa17.83■□□□□ 0.45
PTBP1-204ENST00000394601 METTL16Q86W50 562 aaKnown RBP17.83■□□□□ 0.45
PTBP1-204ENST00000394601 BMP6P22004 513 aa17.83■□□□□ 0.44
PTBP1-204ENST00000394601 IFIT3O14879 490 aaKnown RBP17.83■□□□□ 0.44
PTBP1-204ENST00000394601 MMP1P03956 469 aa17.83■□□□□ 0.44
PTBP1-204ENST00000394601 GOLGA8FQ08AF8 430 aa17.83■□□□□ 0.44
PTBP1-204ENST00000394601 GOLGA8DPQ0D2H9 430 aa17.83■□□□□ 0.44
PTBP1-204ENST00000394601 SEC23AQ15436 765 aa17.83■□□□□ 0.44
PTBP1-204ENST00000394601 RIOK1Q9BRS2 568 aaKnown RBP17.83■□□□□ 0.44
PTBP1-204ENST00000394601 CNNM2Q9H8M5 875 aa17.83■□□□□ 0.44
PTBP1-204ENST00000394601 GRIN1Q05586 938 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 SMARCE1Q969G3 411 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 CDCA7Q9BWT1 371 aaPredicted RBP17.82■□□□□ 0.44
PTBP1-204ENST00000394601 KRT23Q9C075 422 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 NAT10Q9H0A0 1025 aaKnown RBP17.82■□□□□ 0.44
PTBP1-204ENST00000394601 PLEKHA4Q9H4M7 779 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
PTBP1-204ENST00000394601 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 SLC4A4Q9Y6R1 1079 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 DDB1Q16531 1140 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms