RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CAVIN1Q6NZI2 390 aaKnown RBP17.49■□□□□ 0.39
CCT4-201ENST00000394440 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
CCT4-201ENST00000394440 ORC3Q9UBD5 711 aaPredicted RBP17.49■□□□□ 0.39
CCT4-201ENST00000394440 ERICH2A1L162 156 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 GOLGA8AA7E2F4 631 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 USP17L8P0C7I0 530 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 KRT85P78386 507 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 UBAC1Q9BSL1 405 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 MYL10Q9BUA6 226 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 MCM9Q9NXL9 1143 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 MYH6P13533 1939 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 USP5P45974 858 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 RHBDL3P58872 404 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 ELP1O95163 1332 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 PSME4Q14997 1843 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 PRDM1O75626 825 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 CDKL5O76039 1030 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
CCT4-201ENST00000394440 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
CCT4-201ENST00000394440 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
CCT4-201ENST00000394440 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
CCT4-201ENST00000394440 NT5C2P49902 561 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 DOK7Q18PE1 504 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 TTC6Q86TZ1 520 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 SLC16A10Q8TF71 515 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
CCT4-201ENST00000394440 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
CCT4-201ENST00000394440 SLC3A2P08195 630 aaKnown RBP17.47■□□□□ 0.39
CCT4-201ENST00000394440 PLCG2P16885 1265 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 UBE2HP62256 183 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 ZNF654Q8IZM8 581 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
CCT4-201ENST00000394440 STK36Q9NRP7 1315 aa17.46■□□□□ 0.39
CCT4-201ENST00000394440 ZNF445P59923 1031 aa17.46■□□□□ 0.39
CCT4-201ENST00000394440 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
CCT4-201ENST00000394440 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
CCT4-201ENST00000394440 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.39
CCT4-201ENST00000394440 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
CCT4-201ENST00000394440 PDE4BQ07343 736 aa17.46■□□□□ 0.38
CCT4-201ENST00000394440 ZSCAN23Q3MJ62 389 aa17.46■□□□□ 0.38
CCT4-201ENST00000394440 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.38
CCT4-201ENST00000394440 IQCA1Q86XH1 822 aa17.46■□□□□ 0.38
CCT4-201ENST00000394440 CCDC144CPQ8IYA2 1237 aa17.46■□□□□ 0.38
CCT4-201ENST00000394440 SPON1Q9HCB6 807 aa17.46■□□□□ 0.38
CCT4-201ENST00000394440 IFNAR1P17181 557 aa17.45■□□□□ 0.38
CCT4-201ENST00000394440 FOSBP53539 338 aa17.45■□□□□ 0.38
CCT4-201ENST00000394440 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
CCT4-201ENST00000394440 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
CCT4-201ENST00000394440 GAS2L3Q86XJ1 694 aa17.45■□□□□ 0.38
CCT4-201ENST00000394440 TEX11Q8IYF3 940 aa17.45■□□□□ 0.38
CCT4-201ENST00000394440 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
CCT4-201ENST00000394440 FLT1P17948 1338 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 GOLGA6L3A6NEY3 463 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 RTN1Q16799 776 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 MAPKAPK5Q8IW41 473 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 PHKBQ93100 1093 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
CCT4-201ENST00000394440 PPP1R1BQ9UD71 204 aaPredicted RBP17.44■□□□□ 0.38
CCT4-201ENST00000394440 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
CCT4-201ENST00000394440 FKBP1AP62942 108 aaKnown RBP17.43■□□□□ 0.38
CCT4-201ENST00000394440 PPP2R5BQ15173 497 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 LEO1Q8WVC0 666 aaPredicted RBP17.43■□□□□ 0.38
CCT4-201ENST00000394440 MXD3Q9BW11 206 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 FMNL1O95466 1100 aaPredicted RBP17.43■□□□□ 0.38
CCT4-201ENST00000394440 PLCD1P51178 756 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
CCT4-201ENST00000394440 OTUD7BQ6GQQ9 843 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 DYNLL2Q96FJ2 89 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 AIFM3Q96NN9 605 aa17.43■□□□□ 0.38
CCT4-201ENST00000394440 TTF2Q9UNY4 1162 aaKnown RBP17.43■□□□□ 0.38
CCT4-201ENST00000394440 MYH8P13535 1937 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 TROAPQ12815 778 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 AMOTL1Q8IY63 956 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 ALG1Q9BT22 464 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 GJB4Q9NTQ9 266 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
CCT4-201ENST00000394440 CCDC196A0A1B0GTZ2 297 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 FAM47AQ5JRC9 791 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 L1TD1Q5T7N2 865 aaKnown RBP17.42■□□□□ 0.38
CCT4-201ENST00000394440 ATL3Q6DD88 541 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
CCT4-201ENST00000394440 G3V3G9 751 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 ECE2O60344 883 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 DCAF8Q5TAQ9 597 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 RCSD1Q6JBY9 416 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
CCT4-201ENST00000394440 TSPY2A6NKD2 308 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms