RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 RIOK1Q9BRS2 568 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CARD6Q9BX69 1037 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SUDS3Q9H7L9 328 aaPredicted RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 GPHNQ9NQX3 736 aaPredicted RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SORBS3O60504 671 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 MX2P20592 715 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CLCN1P35523 988 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 PDE1AP54750 535 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SESN3P58005 492 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 LMBR1LQ6UX01 489 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 FNBP4Q8N3X1 1017 aaPredicted RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 XAB2Q9HCS7 855 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CTTNBP2NLQ9P2B4 639 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 USH1CQ9Y6N9 552 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SNAPC4Q5SXM2 1469 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 GOLGA6BA6NDN3 693 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 ABL1P00519 1130 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 TXKP42681 527 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 COG7P83436 770 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 RAD51AP2Q09MP3 1159 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 USH1GQ495M9 461 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CDAN1Q8IWY9 1227 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 NYXQ9GZU5 481 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 BZW2Q9Y6E2 419 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 GRM8O00222 908 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 GCNT3O95395 438 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SAT1P21673 171 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 LRMPQ12912 555 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 EP400NLQ6ZTU2 488 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 CCDC13Q8IYE1 715 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 PPP4R1Q8TF05 950 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 PSPC1Q8WXF1 523 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 MYL5Q02045 173 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 KRT81Q14533 505 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 RBBP5Q15291 538 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 PALM2Q8IXS6 379 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 MYCT1Q8N699 235 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 RSAD2Q8WXG1 361 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 SPDL1Q96EA4 605 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 KRT12Q99456 494 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 BAIAP2L1Q9UHR4 511 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
GAPVD1-206ENST00000394104 FRMD3A2A2Y4 597 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 ARHGEF35A5YM69 484 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 POLR2DO15514 142 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 FBLN1P23142 703 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 GUCY2FP51841 1108 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 CDR2Q01850 454 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 ELF2Q15723 593 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 LGSNQ5TDP6 509 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 BRAPQ7Z569 592 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 CHMP6Q96FZ7 201 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 CARD10Q9BWT7 1032 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 EXOC7Q9UPT5 735 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 DAPK1P53355 1430 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 KAT6BQ8WYB5 2073 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 VGLL3A8MV65 326 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 TSTA3Q13630 321 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PPP2R5AQ15172 486 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 CAPN12Q6ZSI9 719 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 DYMQ7RTS9 669 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 MIER3Q7Z3K6 550 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 ZC3H12CQ9C0D7 883 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 HAUS2Q9NVX0 235 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PPFIA2O75334 1257 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 OATP04181 439 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 IFRD2Q12894 506 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 TRIM14Q14142 442 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 DZIP3Q86Y13 1208 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 TTC21BQ7Z4L5 1316 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 LPXNO60711 386 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 CNGA1P29973 690 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PLCB4Q15147 1175 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 CSGALNACT2Q8N6G5 542 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 POMGNT1Q8WZA1 660 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 NAP1L4Q99733 375 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 TOPBP1Q92547 1522 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 DNMBPQ6XZF7 1577 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 WASLO00401 505 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 OAS2P29728 719 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 IL15P40933 162 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PLCD1P51178 756 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PAK1Q13153 545 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PTPROQ16827 1216 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 DCLK2Q8N568 766 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 SKA2Q8WVK7 121 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 ERO1AQ96HE7 468 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 MRPL44Q9H9J2 332 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 NSFL1CQ9UNZ2 370 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 IGF1RP08069 1367 aa6.3□□□□□ -1.4
GAPVD1-206ENST00000394104 PLCG2P16885 1265 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms