RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 CNGA4Q8IV77 575 aa25.91■■□□□ 1.74
RARA-202ENST00000394081 PPM1EQ8WY54 764 aa25.91■■□□□ 1.74
RARA-202ENST00000394081 ZNF496Q96IT1 587 aaPredicted RBP25.91■■□□□ 1.74
RARA-202ENST00000394081 TEX13AQ9BXU3 409 aaPredicted RBP25.91■■□□□ 1.74
RARA-202ENST00000394081 ZSWIM4Q9H7M6 989 aa25.91■■□□□ 1.74
RARA-202ENST00000394081 PTPREP23469 700 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 MAPK8IP2Q13387 824 aaPredicted RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 WASHC4Q2M389 1173 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 ZNF569Q5MCW4 686 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 AIFM3Q96NN9 605 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 ITIH6Q6UXX5 1313 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 SH2B2O14492 632 aaPredicted RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 GCP02774 474 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 CORO7P57737 925 aa25.9■■□□□ 1.74
RARA-202ENST00000394081 IRX3P78415 501 aaPredicted RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 TTC31Q49AM3 519 aaPredicted RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 APTXQ7Z2E3 356 aaKnown RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 CTCFLQ8NI51 663 aaPredicted RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 NAPGQ99747 312 aaPredicted RBP25.9■■□□□ 1.74
RARA-202ENST00000394081 ATP5J2-PTCD1G3V325 749 aa25.89■■□□□ 1.74
RARA-202ENST00000394081 PTCD1O75127 700 aaKnown RBP25.89■■□□□ 1.74
RARA-202ENST00000394081 AARSP49588 968 aaKnown RBP eCLIP25.89■■□□□ 1.74
RARA-202ENST00000394081 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
RARA-202ENST00000394081 IGSF22Q8N9C0 903 aa25.89■■□□□ 1.74
RARA-202ENST00000394081 WASF1Q92558 559 aa25.89■■□□□ 1.74
RARA-202ENST00000394081 TMEM87BQ96K49 555 aa25.89■■□□□ 1.74
RARA-202ENST00000394081 FBXO3Q9UK99 471 aa25.89■■□□□ 1.74
RARA-202ENST00000394081 FOXN1O15353 648 aa25.89■■□□□ 1.73
RARA-202ENST00000394081 MFAP3LO75121 409 aa25.89■■□□□ 1.73
RARA-202ENST00000394081 MCM3P25205 808 aa25.89■■□□□ 1.73
RARA-202ENST00000394081 SPATA1Q5VX52 437 aa25.89■■□□□ 1.73
RARA-202ENST00000394081 APOA5Q6Q788 366 aa25.89■■□□□ 1.73
RARA-202ENST00000394081 SAMSN1Q9NSI8 373 aaKnown RBP25.89■■□□□ 1.73
RARA-202ENST00000394081 EIF3CLB5ME19 914 aaKnown RBP25.88■■□□□ 1.73
RARA-202ENST00000394081 IARSP41252 1262 aaKnown RBP25.88■■□□□ 1.73
RARA-202ENST00000394081 VSNL1P62760 191 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 NTRK3Q16288 839 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 NOSTRINQ8IVI9 506 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 STK11IPQ8N1F8 1099 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 MED15Q96RN5 788 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 EIF3CQ99613 913 aaKnown RBP25.88■■□□□ 1.73
RARA-202ENST00000394081 AKAP2Q9Y2D5 859 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 RBL2Q08999 1139 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 TMTC1Q8IUR5 882 aa25.88■■□□□ 1.73
RARA-202ENST00000394081 FBXO2Q9UK22 296 aaPredicted RBP25.88■■□□□ 1.73
RARA-202ENST00000394081 LAMB4A4D0S4 1761 aa25.87■■□□□ 1.73
RARA-202ENST00000394081 HSP90AA4PQ58FG1 418 aa25.87■■□□□ 1.73
RARA-202ENST00000394081 RAB11FIP4Q86YS3 637 aa25.87■■□□□ 1.73
RARA-202ENST00000394081 ADD3Q9UEY8 706 aaKnown RBP25.87■■□□□ 1.73
RARA-202ENST00000394081 MYH7P12883 1935 aa25.87■■□□□ 1.73
RARA-202ENST00000394081 N4BP1O75113 896 aaKnown RBP25.86■■□□□ 1.73
RARA-202ENST00000394081 PPFIA4O75335 1185 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 FKBP4Q02790 459 aaKnown RBP eCLIP25.86■■□□□ 1.73
RARA-202ENST00000394081 FILIP1LQ4L180 1135 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 RILPL1Q5EBL4 403 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 SGMS1Q86VZ5 419 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 PARP4Q9UKK3 1724 aaKnown RBP25.86■■□□□ 1.73
RARA-202ENST00000394081 CPP00450 1065 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 LRRC31Q6UY01 552 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 TRMT44Q8IYL2 757 aaKnown RBP25.86■■□□□ 1.73
RARA-202ENST00000394081 FAM107BQ9H098 131 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.86■■□□□ 1.73
RARA-202ENST00000394081 CEP126Q9P2H0 1117 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 SERTAD1Q9UHV2 236 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 WWC3Q9ULE0 1092 aa25.86■■□□□ 1.73
RARA-202ENST00000394081 POLR2DO15514 142 aaKnown RBP25.85■■□□□ 1.73
RARA-202ENST00000394081 SLC9C2Q5TAH2 1124 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 CDKAL1Q5VV42 579 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 TTC5Q8N0Z6 440 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 SLC35F6Q8N357 371 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 CCDC102AQ96A19 550 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 CWC25Q9NXE8 425 aaPredicted RBP25.85■■□□□ 1.73
RARA-202ENST00000394081 UBN2Q6ZU65 1347 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 ZBTB43O43298 467 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 PRR29P0C7W0 189 aa25.85■■□□□ 1.73
RARA-202ENST00000394081 SAFBQ15424 915 aaKnown RBP eCLIP25.85■■□□□ 1.73
RARA-202ENST00000394081 TJP1Q07157 1748 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 NID2Q14112 1375 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 GPAA1O43292 621 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 ACTN4O43707 911 aaKnown RBP25.84■■□□□ 1.73
RARA-202ENST00000394081 GTF2A1P52655 376 aaPredicted RBP25.84■■□□□ 1.73
RARA-202ENST00000394081 LRRC24Q50LG9 513 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 EFCAB13Q8IY85 973 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 CEP131Q9UPN4 1083 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 TBC1D2BQ9UPU7 963 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 ATRNO75882 1429 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 MAP9Q49MG5 647 aa25.84■■□□□ 1.73
RARA-202ENST00000394081 PUS7LQ9H0K6 701 aaKnown RBP25.84■■□□□ 1.73
RARA-202ENST00000394081 FOXP1Q9H334 677 aaPredicted RBP25.84■■□□□ 1.73
RARA-202ENST00000394081 GEMIN8Q9NWZ8 242 aaKnown RBP25.84■■□□□ 1.73
RARA-202ENST00000394081 SRPRBQ9Y5M8 271 aaKnown RBP25.84■■□□□ 1.73
RARA-202ENST00000394081 TEX33O43247 280 aa25.83■■□□□ 1.73
RARA-202ENST00000394081 PHKG2P15735 406 aa25.83■■□□□ 1.73
RARA-202ENST00000394081 PHKBQ93100 1093 aa25.83■■□□□ 1.73
RARA-202ENST00000394081 NBPF3Q9H094 633 aa25.83■■□□□ 1.73
RARA-202ENST00000394081 RHOXF2BP0C7M4 288 aa25.83■■□□□ 1.72
RARA-202ENST00000394081 AMPD2Q01433 879 aa25.83■■□□□ 1.72
RARA-202ENST00000394081 RHOXF2Q9BQY4 288 aa25.83■■□□□ 1.72
RARA-202ENST00000394081 JRKLQ9Y4A0 524 aa25.83■■□□□ 1.72
RARA-202ENST00000394081 FMNL1O95466 1100 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms