RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 CCL15Q16663 113 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 HOOK2Q96ED9 719 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 PLEKHF1Q96S99 279 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 MXD3Q9BW11 206 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 TAF1P21675 1872 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 WTIPA6NIX2 430 aaPredicted RBP10.07□□□□□ -0.8
CASP4-201ENST00000393150 CETPP11597 493 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 MYD88Q99836 296 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 ZCCHC17Q9NP64 241 aaKnown RBP10.07□□□□□ -0.8
CASP4-201ENST00000393150 MINPP1Q9UNW1 487 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 A0A0C4DFX4 3053 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 ZNF804BA4D1E1 1349 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 GJB1P08034 283 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 CTSWP56202 376 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 LACTBP83111 547 aaPredicted RBP10.07□□□□□ -0.8
CASP4-201ENST00000393150 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 RNF208Q9H0X6 261 aa10.07□□□□□ -0.8
CASP4-201ENST00000393150 RBBP6Q7Z6E9 1792 aaKnown RBP10.06□□□□□ -0.8
CASP4-201ENST00000393150 SCN9AQ15858 1988 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 CENPFP49454 3210 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 F8W031 263 aaPredicted RBP10.06□□□□□ -0.8
CASP4-201ENST00000393150 TLR2O60603 784 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 USP2O75604 605 aaPredicted RBP10.06□□□□□ -0.8
CASP4-201ENST00000393150 S1PR4O95977 384 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 GRK4P32298 578 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 GJA8P48165 433 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 SNAPC2Q13487 334 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 RASA3Q14644 834 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 NBPF12Q5TAG4 269 aaPredicted RBP10.06□□□□□ -0.8
CASP4-201ENST00000393150 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
CASP4-201ENST00000393150 ZNF804AQ7Z570 1209 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 ADAMTS19Q8TE59 1207 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 PTPN18Q99952 460 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 FZD1Q9UP38 647 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 SZT2Q5T011 3432 aa10.06□□□□□ -0.8
CASP4-201ENST00000393150 CHL1O00533 1208 aa10.05□□□□□ -0.8
CASP4-201ENST00000393150 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
CASP4-201ENST00000393150 TMPOP42166 694 aaKnown RBP10.05□□□□□ -0.8
CASP4-201ENST00000393150 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
CASP4-201ENST00000393150 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
CASP4-201ENST00000393150 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
CASP4-201ENST00000393150 FKBPLQ9UIM3 349 aa10.05□□□□□ -0.8
CASP4-201ENST00000393150 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
CASP4-201ENST00000393150 TFRCP02786 760 aaKnown RBP10.04□□□□□ -0.8
CASP4-201ENST00000393150 CCL5P13501 91 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 CTHP32929 405 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 PSMC4P43686 418 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
CASP4-201ENST00000393150 DUSP27Q5VZP5 1158 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 DEFB123Q8N688 67 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 BRI3BPQ8WY22 251 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 ZBED3Q96IU2 234 aaPredicted RBP10.04□□□□□ -0.8
CASP4-201ENST00000393150 CD209Q9NNX6 404 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 SRRDQ9UH36 339 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 RIPOR2Q9Y4F9 1068 aa10.04□□□□□ -0.8
CASP4-201ENST00000393150 FKBP1AP62942 108 aaKnown RBP10.03□□□□□ -0.8
CASP4-201ENST00000393150 KCNC4Q03721 635 aa10.03□□□□□ -0.8
CASP4-201ENST00000393150 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
CASP4-201ENST00000393150 WWC1Q8IX03 1113 aa10.03□□□□□ -0.8
CASP4-201ENST00000393150 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CASP4-201ENST00000393150 TMOD2Q9NZR1 351 aa10.03□□□□□ -0.8
CASP4-201ENST00000393150 STXBP5LQ9Y2K9 1186 aa10.03□□□□□ -0.8
CASP4-201ENST00000393150 MYPNQ86TC9 1320 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 FCGRTP55899 365 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 MTFR1Q15390 333 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 CCDC30Q5VVM6 783 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 DCAF15Q66K64 600 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 U2AF1L4Q8WU68 220 aaKnown RBP10.02□□□□□ -0.81
CASP4-201ENST00000393150 JARID2Q92833 1246 aaPredicted RBP10.02□□□□□ -0.81
CASP4-201ENST00000393150 PRMT6Q96LA8 375 aaPredicted RBP10.02□□□□□ -0.81
CASP4-201ENST00000393150 GREM2Q9H772 168 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 HTTP42858 3142 aa10.02□□□□□ -0.81
CASP4-201ENST00000393150 DLG5Q8TDM6 1919 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 BRCA2P51587 3418 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 ANKRD18BA2A2Z9 1011 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 FBXO45P0C2W1 286 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 VGLL4Q14135 290 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 KRT24Q2M2I5 525 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 FAM43AQ8N2R8 423 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 STAP2Q9UGK3 403 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 SERPINA10Q9UK55 444 aa10.01□□□□□ -0.81
CASP4-201ENST00000393150 FCF1Q9Y324 198 aaKnown RBP10.01□□□□□ -0.81
CASP4-201ENST00000393150 PSME4Q14997 1843 aa10□□□□□ -0.81
CASP4-201ENST00000393150 SGPL1O95470 568 aa10□□□□□ -0.81
CASP4-201ENST00000393150 ITGA6P23229 1130 aa10□□□□□ -0.81
CASP4-201ENST00000393150 WDR43Q15061 677 aaKnown RBP eCLIP10□□□□□ -0.81
CASP4-201ENST00000393150 TAF7LQ5H9L4 462 aa10□□□□□ -0.81
CASP4-201ENST00000393150 NECAB2Q7Z6G3 386 aa10□□□□□ -0.81
CASP4-201ENST00000393150 GLMNQ92990 594 aa10□□□□□ -0.81
CASP4-201ENST00000393150 ARID3AQ99856 593 aa10□□□□□ -0.81
CASP4-201ENST00000393150 STK31Q9BXU1 1019 aa10□□□□□ -0.81
CASP4-201ENST00000393150 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms