RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 ALG1Q9BT22 464 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 GNG11P61952 73 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 ANTXR2P58335 489 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 SDR42E1Q8WUS8 393 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
BRF1-204ENST00000392557 STRBPQ96SI9 672 aaKnown RBP12.45□□□□□ -0.42
BRF1-204ENST00000392557 RTEL1Q9NZ71 1219 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
BRF1-204ENST00000392557 MYH3P11055 1940 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 TERF2Q15554 542 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 ATL3Q6DD88 541 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 CYB5R4Q7L1T6 521 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 FBXO18Q8NFZ0 1043 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 AK7Q96M32 723 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 CLIC6Q96NY7 704 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 EPC1Q9H2F5 836 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 SENP2Q9HC62 589 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 ZBTB22O15209 634 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 FDPSP14324 419 aaKnown RBP12.44□□□□□ -0.42
BRF1-204ENST00000392557 RFC4P35249 363 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
BRF1-204ENST00000392557 NLRP12P59046 1061 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
BRF1-204ENST00000392557 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
BRF1-204ENST00000392557 IFNL3Q8IZI9 196 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 CPLX3Q8WVH0 158 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 IMPACTQ9P2X3 320 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■□□ 18
BRF1-204ENST00000392557 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
BRF1-204ENST00000392557 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 CCDC34Q96HJ3 373 aa12.44□□□□□ -0.42
BRF1-204ENST00000392557 GNL3LQ9NVN8 582 aaKnown RBP12.44□□□□□ -0.42
BRF1-204ENST00000392557 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 NEDD4P46934 1319 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
BRF1-204ENST00000392557 KLRK1P26718 216 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 KLHL10Q6JEL2 608 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 MYO5AQ9Y4I1 1855 aaKnown RBP12.43□□□□□ -0.42
BRF1-204ENST00000392557 CCP110O43303 1012 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 CLCN6P51797 869 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 NACAP1Q9BZK3 213 aa12.43□□□□□ -0.42
BRF1-204ENST00000392557 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
BRF1-204ENST00000392557 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 KIF28PB7ZC32 967 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 SLFN14P0C7P3 912 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 KARSQ15046 597 aaKnown RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 CMTR1Q8N1G2 835 aaKnown RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 FANCLQ9NW38 375 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 ABCC12Q96J65 1359 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 TCRBV5S4A2TA0A5A2 114 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 ETF1P62495 437 aaKnown RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 MYL5Q02045 173 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
BRF1-204ENST00000392557 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 ANKRD36CQ5JPF3 1778 aa12.42□□□□□ -0.42
BRF1-204ENST00000392557 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 YEATS4O95619 227 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 CASQ1P31415 396 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 NUP133Q8WUM0 1156 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 DPF2Q92785 391 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 TAF1P21675 1872 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 A0A1W2PQ27 194 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 A0A1W2PQ64 194 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 A0A1W2PQD8 194 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 ZSCAN12O43309 604 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 ADKP55263 362 aaKnown RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 EVCP57679 992 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 ZNF827Q17R98 1081 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 TRMT44Q8IYL2 757 aaKnown RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 PRDM1O75626 825 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
BRF1-204ENST00000392557 IARSP41252 1262 aaKnown RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 DYNLL1P63167 89 aaKnown RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms