RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAF3IP2-208ENST00000392556 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
TRAF3IP2-208ENST00000392556 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
TRAF3IP2-208ENST00000392556 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
TRAF3IP2-208ENST00000392556 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 BCAMP50895 628 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SOX10P56693 466 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 KRT222Q8N1A0 295 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CEP126Q9P2H0 1117 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 AOX1Q06278 1338 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SPDYE5A6NIY4 337 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SLC34A2O95436 690 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 MBD3O95983 291 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 NCBP1Q09161 790 aaKnown RBP13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ERO1BQ86YB8 467 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ELP3Q9H9T3 547 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SP3Q02447 781 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 APOBEC3HQ6NTF7 200 aaKnown RBP13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ZFYVE28Q9HCC9 887 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 DENND2AQ9ULE3 1009 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 FZD1Q9UP38 647 aa13.42□□□□□ -0.26
TRAF3IP2-208ENST00000392556 PDS5AQ29RF7 1337 aaKnown RBP13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 TPM3P06753 285 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CETPP11597 493 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 GJA5P36382 358 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 VGLL4Q14135 290 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 OTOP1Q7RTM1 612 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 KIF18AQ8NI77 898 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SYCE3A1L190 88 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 GNAI3P08754 354 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CRHR2Q13324 411 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ATG9AQ7Z3C6 839 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 FAM151AQ8WW52 585 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 RBM27Q9P2N5 1060 aaKnown RBP13.41□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 GNRH1P01148 92 aa13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 CCL15Q16663 113 aa13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 SLF2Q8IX21 1173 aa13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 KLHDC4Q8TBB5 520 aa13.4□□□□□ -0.26
TRAF3IP2-208ENST00000392556 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PPATQ06203 517 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PPIL2Q13356 520 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 GRIK5Q16478 980 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 KIAA1524Q8TCG1 905 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PTPN18Q99952 460 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 NOP2P46087 812 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 TAF1CQ15572 869 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 BRI3BPQ8WY22 251 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
TRAF3IP2-208ENST00000392556 APPP05067 770 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PRMT2P55345 433 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 WRNIP1Q96S55 665 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 OTOFQ9HC10 1997 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 MAP4K4O95819 1239 aaPredicted RBP13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CYP2C19P33261 490 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 RARSP54136 660 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 MTX1Q13505 466 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SPTY2D1Q68D10 685 aaPredicted RBP13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
TRAF3IP2-208ENST00000392556 RAD50Q92878 1312 aa13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 KIF22Q14807 665 aa13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 DAGLAQ9Y4D2 1042 aa13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CD99L2Q8TCZ2 262 aa13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-208ENST00000392556 TLR2O60603 784 aa13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 ENTPD3O75355 529 aa13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 REC8O95072 547 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms