RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 C12orf60Q5U649 245 aa30.31■■■□□ 2.44
HOMER3-202ENST00000392351 CRACR2BQ8N4Y2 399 aaPredicted RBP30.31■■■□□ 2.44
HOMER3-202ENST00000392351 DSCC1Q9BVC3 393 aa30.31■■■□□ 2.44
HOMER3-202ENST00000392351 FKBP1BP68106 108 aa30.3■■■□□ 2.44
HOMER3-202ENST00000392351 SBK1Q52WX2 424 aa30.3■■■□□ 2.44
HOMER3-202ENST00000392351 TRIM34Q9BYJ4 488 aa30.3■■■□□ 2.44
HOMER3-202ENST00000392351 EHD4Q9H223 541 aa30.3■■■□□ 2.44
HOMER3-202ENST00000392351 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.3■■■□□ 2.44
HOMER3-202ENST00000392351 HERC5Q9UII4 1024 aaKnown RBP30.3■■■□□ 2.44
HOMER3-202ENST00000392351 SERPINB13Q9UIV8 391 aa30.3■■■□□ 2.44
HOMER3-202ENST00000392351 MINDY4BA8MYZ0 360 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 USP2O75604 605 aaPredicted RBP30.29■■■□□ 2.44
HOMER3-202ENST00000392351 FGAP02671 866 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 ALX1Q15699 326 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 ARMC9Q7Z3E5 817 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 FOXP4Q8IVH2 680 aaPredicted RBP30.29■■■□□ 2.44
HOMER3-202ENST00000392351 ZNF341Q9BYN7 854 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 ZMYM6O95789 1325 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 LAMA4Q16363 1823 aa30.29■■■□□ 2.44
HOMER3-202ENST00000392351 TBC1D12O60347 775 aa30.28■■■□□ 2.44
HOMER3-202ENST00000392351 IREB2P48200 963 aaKnown RBP30.28■■■□□ 2.44
HOMER3-202ENST00000392351 MAP3K10Q02779 954 aa30.28■■■□□ 2.44
HOMER3-202ENST00000392351 SMIM22K7EJ46 135 aa30.28■■■□□ 2.44
HOMER3-202ENST00000392351 KIAA1211Q6ZU35 1233 aa30.28■■■□□ 2.44
HOMER3-202ENST00000392351 METTL16Q86W50 562 aaKnown RBP30.28■■■□□ 2.44
HOMER3-202ENST00000392351 DNAJC18Q9H819 358 aa30.28■■■□□ 2.44
HOMER3-202ENST00000392351 PTH1RQ03431 593 aa30.27■■■□□ 2.44
HOMER3-202ENST00000392351 MAP3K11Q16584 847 aa30.27■■■□□ 2.44
HOMER3-202ENST00000392351 KLRG1Q96E93 195 aa30.27■■■□□ 2.44
HOMER3-202ENST00000392351 WRNIP1Q96S55 665 aa30.27■■■□□ 2.44
HOMER3-202ENST00000392351 ABT1Q9ULW3 272 aaKnown RBP30.27■■■□□ 2.44
HOMER3-202ENST00000392351 UBE2Q2LH0YL09 131 aa30.26■■■□□ 2.43
HOMER3-202ENST00000392351 DYNLL2Q96FJ2 89 aa30.26■■■□□ 2.43
HOMER3-202ENST00000392351 ANO2Q9NQ90 1003 aa30.26■■■□□ 2.43
HOMER3-202ENST00000392351 CREBZFQ9NS37 354 aa30.26■■■□□ 2.43
HOMER3-202ENST00000392351 ATAD5Q96QE3 1844 aa30.25■■■□□ 2.43
HOMER3-202ENST00000392351 HUNKP57058 714 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 GABPAQ06546 454 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 PPARAQ07869 468 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 SAPCD2Q86UD0 394 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.24■■■□□ 2.43
HOMER3-202ENST00000392351 TLL2Q9Y6L7 1015 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 ROBO3Q96MS0 1386 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 PHF20L1A8MW92 1017 aa30.24■■■□□ 2.43
HOMER3-202ENST00000392351 DOCK1Q14185 1865 aa30.23■■■□□ 2.43
HOMER3-202ENST00000392351 STK11IPQ8N1F8 1099 aa30.23■■■□□ 2.43
HOMER3-202ENST00000392351 SLC44A5Q8NCS7 719 aa30.23■■■□□ 2.43
HOMER3-202ENST00000392351 LSG1Q9H089 658 aaKnown RBP30.23■■■□□ 2.43
HOMER3-202ENST00000392351 ZNF112Q9UJU3 913 aa30.23■■■□□ 2.43
HOMER3-202ENST00000392351 INPP5BP32019 993 aa30.22■■■□□ 2.43
HOMER3-202ENST00000392351 C16orf86Q6ZW13 317 aa30.22■■■□□ 2.43
HOMER3-202ENST00000392351 CTNNA3Q9UI47 895 aa30.22■■■□□ 2.43
HOMER3-202ENST00000392351 HSPA6P17066 643 aa30.21■■■□□ 2.43
HOMER3-202ENST00000392351 MAP3K9P80192 1104 aa30.21■■■□□ 2.43
HOMER3-202ENST00000392351 LDLRAD1Q5T700 205 aa30.21■■■□□ 2.43
HOMER3-202ENST00000392351 ANKRD13AQ8IZ07 590 aa30.21■■■□□ 2.43
HOMER3-202ENST00000392351 MAP4K1Q92918 833 aa30.21■■■□□ 2.43
HOMER3-202ENST00000392351 ZKSCAN4Q969J2 545 aaPredicted RBP30.21■■■□□ 2.43
HOMER3-202ENST00000392351 SWAP70Q9UH65 585 aa30.21■■■□□ 2.43
HOMER3-202ENST00000392351 SHMT1P34896 483 aa30.2■■■□□ 2.43
HOMER3-202ENST00000392351 HAND2P61296 217 aa30.2■■■□□ 2.43
HOMER3-202ENST00000392351 CTDSPL2Q05D32 466 aa30.2■■■□□ 2.43
HOMER3-202ENST00000392351 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.2■■■□□ 2.43
HOMER3-202ENST00000392351 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.2■■■□□ 2.43
HOMER3-202ENST00000392351 TAOK2Q9UL54 1235 aa30.2■■■□□ 2.43
HOMER3-202ENST00000392351 SLC3A2P08195 630 aaKnown RBP30.2■■■□□ 2.42
HOMER3-202ENST00000392351 CDK8P49336 464 aa30.2■■■□□ 2.42
HOMER3-202ENST00000392351 VGLL4Q14135 290 aa30.2■■■□□ 2.42
HOMER3-202ENST00000392351 TATDN1Q6P1N9 297 aa30.2■■■□□ 2.42
HOMER3-202ENST00000392351 CLMNQ96JQ2 1002 aa30.2■■■□□ 2.42
HOMER3-202ENST00000392351 ANAPC4Q9UJX5 808 aa30.2■■■□□ 2.42
HOMER3-202ENST00000392351 CSADQ9Y600 493 aa30.2■■■□□ 2.42
HOMER3-202ENST00000392351 U3KPZ7 1027 aaPredicted RBP30.2■■■□□ 2.42
HOMER3-202ENST00000392351 HTRA3P83110 453 aa30.19■■■□□ 2.42
HOMER3-202ENST00000392351 RRP1BQ14684 758 aaKnown RBP30.19■■■□□ 2.42
HOMER3-202ENST00000392351 ZNF213O14771 459 aa30.18■■■□□ 2.42
HOMER3-202ENST00000392351 IMMTQ16891 758 aaKnown RBP30.18■■■□□ 2.42
HOMER3-202ENST00000392351 RBM8AQ9Y5S9 174 aaKnown RBP30.18■■■□□ 2.42
HOMER3-202ENST00000392351 UNCXA6NJT0 531 aa30.17■■■□□ 2.42
HOMER3-202ENST00000392351 CTNND1O60716 968 aaKnown RBP30.17■■■□□ 2.42
HOMER3-202ENST00000392351 REC8O95072 547 aa30.17■■■□□ 2.42
HOMER3-202ENST00000392351 GDF11O95390 407 aa30.16■■■□□ 2.42
HOMER3-202ENST00000392351 CAP2P40123 477 aa30.16■■■□□ 2.42
HOMER3-202ENST00000392351 PDE4BQ07343 736 aa30.16■■■□□ 2.42
HOMER3-202ENST00000392351 CERKLQ49MI3 558 aaPredicted RBP30.16■■■□□ 2.42
HOMER3-202ENST00000392351 SCYL3Q8IZE3 742 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 NBPF3Q9H094 633 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 ELP3Q9H9T3 547 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 MKNK2Q9HBH9 465 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 ZNF287Q9HBT7 754 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 SNCAIPQ9Y6H5 919 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 PRDM1O75626 825 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 NOL9Q5SY16 702 aaKnown RBP30.15■■■□□ 2.42
HOMER3-202ENST00000392351 RGMBQ6NW40 437 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 HHIPL1Q96JK4 782 aa30.15■■■□□ 2.42
HOMER3-202ENST00000392351 ZNF157P51786 506 aaPredicted RBP30.14■■■□□ 2.42
HOMER3-202ENST00000392351 SHROOM1Q2M3G4 852 aaPredicted RBP30.14■■■□□ 2.42
HOMER3-202ENST00000392351 TBC1D10CQ8IV04 446 aa30.14■■■□□ 2.42
HOMER3-202ENST00000392351 SLC10A4Q96EP9 437 aa30.14■■■□□ 2.42
HOMER3-202ENST00000392351 RASSF10A6NK89 507 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms