RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
SNORA40.3-201ENST00000390964 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
SNORA40.3-201ENST00000390964 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
SNORA40.3-201ENST00000390964 RHOVQ96L33 236 aa6.33□□□□□ -1.4
SNORA40.3-201ENST00000390964 TMEM74Q96NL1 305 aa6.33□□□□□ -1.4
SNORA40.3-201ENST00000390964 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
SNORA40.3-201ENST00000390964 GFRA2O00451 464 aa6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 GBP2P32456 591 aaPredicted RBP6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 CAMK2GQ13555 558 aaPredicted RBP6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 ERMP1Q7Z2K6 904 aa6.32□□□□□ -1.4
SNORA40.3-201ENST00000390964 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 CYP26A1O43174 497 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 MED26O95402 600 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 PF4P02776 101 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 SSTR4P31391 388 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 CAP2P40123 477 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 CDK8P49336 464 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
SNORA40.3-201ENST00000390964 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 SPINK2P20155 84 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 VAMP1P23763 118 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 HOXA10P31260 410 aaPredicted RBP6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 LDLRAD1Q5T700 205 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 DTX1Q86Y01 620 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 TMEM87AQ8NBN3 555 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 RGS22Q8NE09 1264 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 GATAD2BQ8WXI9 593 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 JARID2Q92833 1246 aaPredicted RBP6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 DUSP23Q9BVJ7 150 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
SNORA40.3-201ENST00000390964 FAM221AA4D161 298 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 CILPO75339 1184 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 LRIG2O94898 1065 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 PDE4BQ07343 736 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 MSMPQ1L6U9 139 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 HID1Q8IV36 788 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 GGT7Q9UJ14 662 aa6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 CCDC9Q9Y3X0 531 aaKnown RBP6.29□□□□□ -1.4
SNORA40.3-201ENST00000390964 MINDY4BA8MYZ0 360 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 F6X3S4 739 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 BPNT1O95861 308 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 F13A1P00488 732 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 GARTP22102 1010 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 GRK4P32298 578 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 SLBPQ14493 270 aaKnown RBP eCLIP6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 MFSD2AQ8NA29 543 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 FOXQ1Q9C009 403 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 FBRSQ9HAH7 460 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 MKNK2Q9HBH9 465 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 METTL5Q9NRN9 209 aaKnown RBP6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 ROBO2Q9HCK4 1378 aa6.28□□□□□ -1.4
SNORA40.3-201ENST00000390964 LEFTY1O75610 366 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 EIF4A3P38919 411 aaKnown RBP6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 MPP2Q14168 576 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 SNAP47Q5SQN1 464 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 ARMCX6Q7L4S7 300 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 TOP6BLQ8N6T0 577 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 COPRSQ9NQ92 184 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 ADAM30Q9UKF2 790 aa6.27□□□□□ -1.41
SNORA40.3-201ENST00000390964 GREM1O60565 184 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 PRNPP04156 253 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 PGRP06401 933 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 ZNF76P36508 570 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 FAM160A1Q05DH4 1040 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 NKG7Q16617 165 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 FAM196AQ6ZSG2 479 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 FAM214BQ7L5A3 538 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 MRPL41Q8IXM3 137 aaKnown RBP6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 LRRC4CQ9HCJ2 640 aa6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 BSDC1Q9NW68 430 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 ZC3H7BQ9UGR2 993 aaKnown RBP6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 SUPT16HQ9Y5B9 1047 aaKnown RBP6.26□□□□□ -1.41
SNORA40.3-201ENST00000390964 PRR36Q9H6K5 1346 aa6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 IGF2BP3O00425 579 aaKnown RBP eCLIP6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 CST3P01034 146 aaPredicted RBP6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 FANCCQ00597 558 aa6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 SLC6A19Q695T7 634 aa6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 LRRC3Q9BY71 257 aa6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 TJP2Q9UDY2 1190 aa6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 GTF2IRD1Q9UHL9 959 aa6.25□□□□□ -1.41
SNORA40.3-201ENST00000390964 EOMESO95936 686 aa6.24□□□□□ -1.41
SNORA40.3-201ENST00000390964 RECKO95980 971 aa6.24□□□□□ -1.41
SNORA40.3-201ENST00000390964 WNT11O96014 354 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms