RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 MYH1P12882 1939 aa18.07■□□□□ 0.48
IGHV3-53-201ENST00000390627 DDX60LQ5H9U9 1706 aaKnown RBP18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 POLR3DP05423 398 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 GNAT2P19087 354 aa18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 INPP5BP32019 993 aa18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 NOL9Q5SY16 702 aaKnown RBP18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 AMOTL1Q8IY63 956 aa18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 ZKSCAN4Q969J2 545 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 STRBPQ96SI9 672 aaKnown RBP18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 MCM9Q9NXL9 1143 aa18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 SNCAIPQ9Y6H5 919 aa18.06■□□□□ 0.48
IGHV3-53-201ENST00000390627 SPDYE5A6NIY4 337 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 PHF20L1A8MW92 1017 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 M0R2C6 588 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 PRKAB2O43741 272 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 KIF23Q02241 960 aaPredicted RBP18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 METTL16Q86W50 562 aaKnown RBP18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 OPTNQ96CV9 577 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 EHD4Q9H223 541 aa18.05■□□□□ 0.48
IGHV3-53-201ENST00000390627 FAM196BA6NMK8 535 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 CTNND1O60716 968 aaKnown RBP18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 MKRN3Q13064 507 aaKnown RBP18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 SLC4A8Q2Y0W8 1093 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 ERO1BQ86YB8 467 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 SCYL3Q8IZE3 742 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 BEGAINQ9BUH8 593 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 PICK1Q9NRD5 415 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 SIPA1L1O43166 1804 aa18.04■□□□□ 0.48
IGHV3-53-201ENST00000390627 MANSC4A6NHS7 340 aaPredicted RBP18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 HIP1O00291 1037 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 SLURP2P0DP57 97 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 SREBF2Q12772 1141 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 GIMAP6Q6P9H5 292 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 OTUD5Q96G74 571 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 ZIC5Q96T25 663 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 TAOK2Q9UL54 1235 aa18.03■□□□□ 0.48
IGHV3-53-201ENST00000390627 HSPA1AP0DMV8 641 aaKnown RBP18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 HSPA1BP0DMV9 641 aaKnown RBP18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 SDSP20132 328 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 GJA5P36382 358 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 PLCD1P51178 756 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 PPATQ06203 517 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 PPIL2Q13356 520 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 DNAJC18Q9H819 358 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 WBP1LQ9NX94 342 aa18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 ARPP21Q9UBL0 812 aaPredicted RBP18.02■□□□□ 0.48
IGHV3-53-201ENST00000390627 DOCK1Q14185 1865 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 GSG1L2A8MUP6 293 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 CAP2P40123 477 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 NACAP1Q9BZK3 213 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
IGHV3-53-201ENST00000390627 A0A0D9SFI3 127 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 PATL2C9JE40 543 aaKnown RBP18■□□□□ 0.47
IGHV3-53-201ENST00000390627 USP17L12C9JPN9 530 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 USP17L21D6R901 530 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 CA12O43570 354 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 APPP05067 770 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 TDO2P48775 406 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 INHBEP58166 350 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 NMIQ13287 307 aaPredicted RBP18■□□□□ 0.47
IGHV3-53-201ENST00000390627 FAM227BQ96M60 508 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 GINM1Q9NU53 330 aa18■□□□□ 0.47
IGHV3-53-201ENST00000390627 BAZ2AQ9UIF9 1905 aaKnown RBP18■□□□□ 0.47
IGHV3-53-201ENST00000390627 LAMB1P07942 1786 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 CYP2D6P10635 497 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 PTPRAP18433 802 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 GTF2A2P52657 109 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 GABPAQ06546 454 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 SBK1Q52WX2 424 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 C12orf60Q5U649 245 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 EPB41L4AQ9HCS5 686 aaPredicted RBP17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 SWAP70Q9UH65 585 aa17.99■□□□□ 0.47
IGHV3-53-201ENST00000390627 IRF6O14896 467 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 ASNSP08243 561 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 TM4SF4P48230 202 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 SNAPC2Q13487 334 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 CTR9Q6PD62 1173 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 IFNL3Q8IZI9 196 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 NAPBQ9H115 298 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
IGHV3-53-201ENST00000390627 RRP1BQ14684 758 aaKnown RBP17.97■□□□□ 0.47
IGHV3-53-201ENST00000390627 CERKLQ49MI3 558 aaPredicted RBP17.97■□□□□ 0.47
IGHV3-53-201ENST00000390627 SAGE1Q9NXZ1 904 aa17.97■□□□□ 0.47
IGHV3-53-201ENST00000390627 KCNH4Q9UQ05 1017 aa17.97■□□□□ 0.47
IGHV3-53-201ENST00000390627 ZHX2Q9Y6X8 837 aa17.97■□□□□ 0.47
IGHV3-53-201ENST00000390627 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
IGHV3-53-201ENST00000390627 CYP2D7A0A087X1C5 515 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 CCL15-CCL14A0A0B4J2E2 113 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms