RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 CCDC169A6NNP5 214 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 SH3BP5O60239 455 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 SMC1BQ8NDV3 1235 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 XAGE2Q96GT9 111 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 ATP5DP30049 168 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 PPP1R2P41236 205 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 KRT24Q2M2I5 525 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 BAG1Q99933 345 aaPredicted RBP13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 PROCA1Q8NCQ7 364 aaPredicted RBP13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 SLC27A2O14975 620 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 STRN3Q13033 797 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 HDXQ7Z353 690 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 V9GYY5 206 aaPredicted RBP13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 CUTAO60888 179 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 CALCRLQ16602 461 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 TTC38Q5R3I4 469 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 UBLCP1Q8WVY7 318 aaPredicted RBP13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 NOC4LQ9BVI4 516 aaKnown RBP13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 ARMT1Q9H993 441 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 A0A1B0GVL5 298 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 XRCC6P12956 609 aaKnown RBP eCLIP13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 KCNA6P17658 529 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 PIK3AP1Q6ZUJ8 805 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 CCDC26Q8TAB7 109 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 PPP1R9BQ96SB3 815 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 PREX2Q70Z35 1606 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 IPO4Q8TEX9 1081 aaKnown RBP13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 CDC42BPBQ9Y5S2 1711 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 GMNNO75496 209 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 HAUS7Q99871 368 aa13.74□□□□□ -0.21
KCNQ3-201ENST00000388996 SETDB1Q15047 1291 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 KCNK9Q9NPC2 374 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 MLH3Q9UHC1 1453 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 CYP26C1Q6V0L0 522 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 TRIM6Q9C030 488 aaPredicted RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 CPA1P15085 419 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 CPLX4Q7Z7G2 160 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 LEO1Q8WVC0 666 aaPredicted RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 HECW2Q9P2P5 1572 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 SPATA5Q8NB90 893 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 ZHX1Q9UKY1 873 aaPredicted RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 NPC1L1Q9UHC9 1359 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 DNAJC21Q5F1R6 531 aaKnown RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 IVNS1ABPQ9Y6Y0 642 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 ECM2O94769 699 aaPredicted RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 CAPN2P17655 700 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 EIF6P56537 245 aaKnown RBP13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 RASA3Q14644 834 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
KCNQ3-201ENST00000388996 PDE8AO60658 829 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 GPHNQ9NQX3 736 aaPredicted RBP13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 QRICH2Q9H0J4 1663 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 EBAG9O00559 213 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 LARGE2Q8N3Y3 721 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 TET3O43151 1660 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 ZEB2O60315 1214 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 CIB2O75838 187 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 NAPGQ99747 312 aaPredicted RBP13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 APPBP2Q92624 585 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 POLR2DO15514 142 aaKnown RBP13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 CCT6BQ92526 530 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 VPS18Q9P253 973 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 ASIC2Q16515 512 aa13.72□□□□□ -0.21
KCNQ3-201ENST00000388996 UAP1Q16222 522 aaPredicted RBP13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 FAM204AQ9H8W3 233 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 UTP11Q9Y3A2 253 aaKnown RBP13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 CLUL1Q15846 466 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 KRT9P35527 623 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 PAK1Q13153 545 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 MYOM2P54296 1465 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 KDRP35968 1356 aa13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
KCNQ3-201ENST00000388996 CSGALNACT2Q8N6G5 542 aa13.71□□□□□ -0.22
KCNQ3-201ENST00000388996 ARFGAP2Q8N6H7 521 aa13.71□□□□□ -0.22
KCNQ3-201ENST00000388996 AZI2Q9H6S1 392 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms