RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ZBTB37Q5TC79 503 aa5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 BNC2Q6ZN30 1099 aaPredicted RBP5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 FAM196AQ6ZSG2 479 aa5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 NT5DC4Q86YG4 428 aa5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 ZNF296Q8WUU4 475 aaPredicted RBP5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 CCSER2Q9H7U1 834 aa5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 ATG3Q9NT62 314 aa5.43□□□□□ -1.54
RNU6-39P-201ENST00000384344 HDLBPQ00341 1268 aaKnown RBP5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 APOBRQ0VD83 1088 aa5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 ISL2Q96A47 359 aa5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 TBC1D32Q96NH3 1257 aa5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 METTL22Q9BUU2 404 aaPredicted RBP5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 WNT10AQ9GZT5 417 aa5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 DDX41Q9UJV9 622 aaKnown RBP5.42□□□□□ -1.54
RNU6-39P-201ENST00000384344 PGRP06401 933 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 NEFMP07197 916 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 ERCC5P28715 1186 aaPredicted RBP5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 GRK4P32298 578 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 RING1Q06587 406 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 GNL2Q13823 731 aaKnown RBP5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 CPSF6Q16630 551 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 CYP27C1Q4G0S4 372 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 ZNF394Q53GI3 561 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 PRSS36Q5K4E3 855 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 DUSP27Q5VZP5 1158 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 FBXL19Q6PCT2 694 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 HID1Q8IV36 788 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 FBXL6Q8N531 539 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 SPATA32Q96LK8 384 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 MFSD14AQ96MC6 490 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 OSBPL1AQ9BXW6 950 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 LRRC3Q9BY71 257 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 TGIF2Q9GZN2 237 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 LGR6Q9HBX8 967 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 KCNQ5Q9NR82 932 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 PRKAG2Q9UGJ0 569 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 ADAMTS1Q9UHI8 967 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 PCDHGB7Q9Y5F8 929 aa5.41□□□□□ -1.54
RNU6-39P-201ENST00000384344 FAM221AA4D161 298 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 GFRA2O00451 464 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 TLR3O15455 904 aaKnown RBP5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 PLCG1P19174 1290 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 ZNF165P49910 485 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 YARSP54577 528 aaKnown RBP5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 C9orf131Q5VYM1 1079 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 REC114Q7Z4M0 266 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 ZAR1Q86SH2 424 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 METTL16Q86W50 562 aaKnown RBP5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 NKD1Q969G9 470 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 NT5C1AQ9BXI3 368 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 ADAM30Q9UKF2 790 aa5.4□□□□□ -1.54
RNU6-39P-201ENST00000384344 WDR64B1ANS9 1081 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 GREM1O60565 184 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 LRIG2O94898 1065 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 GARTP22102 1010 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 MCM4P33991 863 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 GRIK1P39086 918 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 CDK8P49336 464 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
RNU6-39P-201ENST00000384344 CDK5R2Q13319 367 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 COL9A2Q14055 689 aaPredicted RBP5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 SEZ6Q53EL9 994 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 ZNF746Q6NUN9 644 aaPredicted RBP5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 ARHGAP27Q6ZUM4 889 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 ARMCX6Q7L4S7 300 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 MFSD2AQ8NA29 543 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 SHKBP1Q8TBC3 707 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 FOXQ1Q9C009 403 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 UBP1Q9NZI7 540 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 INPP5FQ9Y2H2 1132 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 LEMD3Q9Y2U8 911 aa5.38□□□□□ -1.55
RNU6-39P-201ENST00000384344 DYNC1LI2O43237 492 aaPredicted RBP5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 GRIN3BO60391 1043 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 ADAM23O75077 832 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 HTR3BO95264 441 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 FAM87AP0C7U9 286 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 IMPDH2P12268 514 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 NTF4P34130 210 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 CAP2P40123 477 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 RACK1P63244 317 aaKnown RBP5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 SLC6A19Q695T7 634 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 OGFOD3Q6PK18 319 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 SEZ6L2Q6UXD5 910 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 VPS37DQ86XT2 251 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 MRPL41Q8IXM3 137 aaKnown RBP5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 REXO1Q8N1G1 1221 aaKnown RBP5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 FAM13CQ8NE31 585 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 FBXO27Q8NI29 283 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 GPRASP2Q96D09 838 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 TMEM87BQ96K49 555 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 BRMS1Q9HCU9 246 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 PRDM10Q9NQV6 1147 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 C1GALT1Q9NS00 363 aa5.37□□□□□ -1.55
RNU6-39P-201ENST00000384344 CST3P01034 146 aaPredicted RBP5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 PAK2Q13177 524 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 LRRFIP1Q32MZ4 808 aaKnown RBP5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 TMEM201Q5SNT2 666 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms