RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CEP104O60308 925 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 BAG2O95816 211 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 KRT9P35527 623 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 APBA1Q02410 837 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 EXOC4Q96A65 974 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 PAG1Q9NWQ8 432 aa13.79□□□□□ -0.2
SRGAP3-202ENST00000383836 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 RILPL1Q5EBL4 403 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 ARHGAP42A6NI28 874 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 MYCNP04198 464 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 FCHSD1Q86WN1 690 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 SCOCQ9UIL1 159 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 LONRF3Q496Y0 759 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 PLCD1P51178 756 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 SLF1Q9BQI6 1058 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 ZNF354CQ86Y25 554 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 P3H4Q92791 437 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
SRGAP3-202ENST00000383836 TBC1D8O95759 1140 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 E2F4Q16254 413 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 PPP2R5EQ16537 467 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 ICE2Q659A1 982 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 MCTP2Q6DN12 878 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 CHST3Q7LGC8 479 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 C6orf50Q9HD87 102 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 TRAF5O00463 557 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 CUTAO60888 179 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 POSTNQ15063 836 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 WDR78Q5VTH9 848 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 ATP2A3Q93084 1043 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 CEP85Q6P2H3 762 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 PEX26Q7Z412 305 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.2
SRGAP3-202ENST00000383836 SPECC1L-ADORA2AF8WAN1 911 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 TRMT112Q9UI30 125 aaKnown RBP13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 FLOT1O75955 427 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 SUN1O94901 812 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 TMED1Q13445 227 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 PARD3Q8TEW0 1356 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 MAGEA9P43362 315 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC197Q8NCU1 140 aa13.77□□□□□ -0.21
SRGAP3-202ENST00000383836 NUP160Q12769 1436 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 CDC25BP30305 580 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 ETF1P62495 437 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 PPP4R1Q8TF05 950 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 ABTB1Q969K4 478 aaPredicted RBP13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 ADKP55263 362 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 PPP1R21Q6ZMI0 780 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 GNAT2P19087 354 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 GNA11P29992 359 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 ANKRD42Q8N9B4 389 aa13.76□□□□□ -0.21
SRGAP3-202ENST00000383836 MYH8P13535 1937 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 TSC22D3Q99576 134 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 CENPKQ9BS16 269 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 SH3BP5O60239 455 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 E2F5Q15329 346 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 ARMC9Q7Z3E5 817 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 KLHDC4Q8TBB5 520 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 KRT5P13647 590 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 TTC19Q6DKK2 380 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 RAPGEF6Q8TEU7 1601 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 SERPINB6P35237 376 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 RNF8O76064 485 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 TRAF1Q13077 416 aa13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-202ENST00000383836 PPP1R13BQ96KQ4 1090 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms