RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 CYP7A1P22680 504 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 INPP5BP32019 993 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 HDAC1Q13547 482 aaPredicted RBP14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 OTUD7AQ8TE49 926 aaPredicted RBP14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 ZKSCAN4Q969J2 545 aaPredicted RBP14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 OPTNQ96CV9 577 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 HOOK2Q96ED9 719 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 HAUS7Q99871 368 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 OSBPL5Q9H0X9 879 aaPredicted RBP14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 PAG1Q9NWQ8 432 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 FLT1P17948 1338 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 SALL3Q9BXA9 1300 aa14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
APOBEC3F-202ENST00000381565 TCRBV5S4A2TA0A5A2 114 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 MANSC4A6NHS7 340 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 ALDH1A1P00352 501 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 PDE6AP16499 860 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 MAP3K10Q02779 954 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 MAP3K12Q12852 859 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 RIOK1Q9BRS2 568 aaKnown RBP14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 TRIM17Q9Y577 477 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 CSADQ9Y600 493 aa14.03□□□□□ -0.16
APOBEC3F-202ENST00000381565 FAM196BA6NMK8 535 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 PHF20L1A8MW92 1017 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 BAG3O95817 575 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 CHGBP05060 677 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 AAMPQ13685 434 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 SLFNL1Q499Z3 407 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 ZSCAN29Q8IWY8 852 aaPredicted RBP14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 TGFBRAP1Q8WUH2 860 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 PTPN18Q99952 460 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 NOL10Q9BSC4 688 aaKnown RBP14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
APOBEC3F-202ENST00000381565 ZNF532Q9HCE3 1301 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 PLCG2P16885 1265 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 INHBEP58166 350 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 CRHR2Q13324 411 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 MAPKAPK5Q8IW41 473 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 PI4K2BQ8TCG2 481 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 MS4A4AQ96JQ5 239 aa14.01□□□□□ -0.17
APOBEC3F-202ENST00000381565 MGAMO43451 1857 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
APOBEC3F-202ENST00000381565 ADD2P35612 726 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 SLC9C2Q5TAH2 1124 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 PIP4P2Q8N4L2 257 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 CD99L2Q8TCZ2 262 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 DNAJC18Q9H819 358 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
APOBEC3F-202ENST00000381565 TTC41PQ6P2S7 1318 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 IRF6O14896 467 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 TBC1D12O60347 775 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 PPIL2Q13356 520 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 ERO1BQ86YB8 467 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 BRI3BPQ8WY22 251 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 ARMC5Q96C12 935 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 GCC1Q96CN9 775 aa13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 GREB1LQ9C091 1923 aaPredicted RBP13.99□□□□□ -0.17
APOBEC3F-202ENST00000381565 IGHDP01880 384 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 RRP1BQ14684 758 aaKnown RBP13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 CERS3Q8IU89 383 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 GPATCH3Q96I76 525 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 SAP30BPQ9UHR5 308 aaKnown RBP13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
APOBEC3F-202ENST00000381565 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 MAGEB6P1A0A0J9YX57 407 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 MX1P20591 662 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 PPATQ06203 517 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 CCL15Q16663 113 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 METTL16Q86W50 562 aaKnown RBP13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 DHX36Q9H2U1 1008 aaKnown RBP13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
APOBEC3F-202ENST00000381565 PTPRAP18433 802 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 EN2P19622 333 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 GTF2A2P52657 109 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 EVX2Q03828 476 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 MOGSQ13724 837 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 UBE3CQ15386 1083 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 CCDC84Q86UT8 332 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 KBTBD3Q8NAB2 608 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms