RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 EIF2AQ9BY44 585 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CSRNP2Q9H175 543 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CLCN2P51788 898 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 HNRNPLLQ8WVV9 542 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CENPKQ9BS16 269 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 ANKRD2Q9GZV1 360 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 WWC3Q9ULE0 1092 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 TTC21AQ8NDW8 1320 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 PPP1R12AO14974 1030 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 SFSWAPQ12872 951 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 TTF1Q15361 905 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 SUGP1Q8IWZ8 645 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 BAG3O95817 575 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF75DP51815 510 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CBX1P83916 185 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CETN1Q12798 172 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 DBN1Q16643 649 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 GKAP1Q5VSY0 366 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC186Q7Z3E2 898 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 APBB1IPQ7Z5R6 666 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 TRMT2AQ8IZ69 625 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 USHBP1Q8N6Y0 703 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 NAPGQ99747 312 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 IL1RAPL1Q9NZN1 696 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 MTUS1Q9ULD2 1270 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 MON2Q7Z3U7 1717 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 DIP2AQ14689 1571 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 WDR19Q8NEZ3 1342 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 EDC4Q6P2E9 1401 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 ACTN4O43707 911 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 STMN1P16949 149 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CFAP100Q494V2 611 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 SESTD1Q86VW0 696 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 EIF3CQ99613 913 aaKnown RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 SLC12A5Q9H2X9 1139 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 FGFR1OP2Q9NVK5 253 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 UBN2Q6ZU65 1347 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 FIBPO43427 364 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ZRANB2O95218 330 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 RCAN1P53805 252 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CUL1Q13616 776 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CYP26C1Q6V0L0 522 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 C19orf44Q9H6X5 657 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 PABPN1LA6NDY0 278 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 STX10O60499 249 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CIB2O75838 187 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CLNS1AP54105 237 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 MAP3K12Q12852 859 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 NONOQ15233 471 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC92Q53HC0 331 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 FYB2Q5VWT5 728 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 FERMT1Q9BQL6 677 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ALDH8A1Q9H2A2 487 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CTNNAL1Q9UBT7 734 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 DLG5Q8TDM6 1919 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 RTL9Q8NET4 1388 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CREB3O43889 395 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ATP5BP06576 529 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ATP2A2P16615 1042 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC102BQ68D86 513 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 RPL26L1Q9UNX3 145 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ZWINTO95229 277 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 TBC1D9Q6ZT07 1266 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ANTXR1Q9H6X2 564 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CNNM2Q9H8M5 875 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 WASLO00401 505 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 FERP16591 822 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 BBOF1Q8ND07 529 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC26Q8TAB7 109 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ANKRD7Q92527 254 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 DONSONQ9NYP3 566 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 MYO9BQ13459 2157 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 PER1O15534 1290 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ILF2Q12905 390 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 WAPLQ7Z5K2 1190 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF513Q8N8E2 541 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 MLKLQ8NB16 471 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 SPZ1Q9BXG8 430 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 BHMT2Q9H2M3 363 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 DIS3Q9Y2L1 958 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 RTCBQ9Y3I0 505 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 TNKSO95271 1327 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 KIDINS220Q9ULH0 1771 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 RPS6KA5O75582 802 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 SMC6Q96SB8 1091 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 ABCC12Q96J65 1359 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 TSPOAP1O95153 1857 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 GPTP24298 496 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 TADA2BQ86TJ2 420 aa5.45□□□□□ -1.54
PTPRD-203ENST00000381196 TRIM6Q9C030 488 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 A1CFQ9NQ94 594 aaKnown RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 FAF1Q9UNN5 650 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-203ENST00000381196 AREL1O15033 823 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 CCT6AP40227 531 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 RBM6P78332 1123 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC84Q86UT8 332 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 NME8Q8N427 588 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF408Q9H9D4 720 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 RRP15Q9Y3B9 282 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 TMEM232C9JQI7 657 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms