RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 GUCY1A2P33402 732 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 FOXP4Q8IVH2 680 aaPredicted RBP18.74■□□□□ 0.59
VPS16-203ENST00000380469 VSTM4Q8IW00 320 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 LCORLQ8N3X6 602 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 DPF2Q92785 391 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 FANCLQ9NW38 375 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.74■□□□□ 0.59
VPS16-203ENST00000380469 KCNJ14Q9UNX9 436 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 V9GYY5 206 aaPredicted RBP18.74■□□□□ 0.59
VPS16-203ENST00000380469 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 SNAP23O00161 211 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 LRP5O75197 1615 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 SUSD4Q5VX71 490 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
VPS16-203ENST00000380469 LRP2BPQ9P2M1 347 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
VPS16-203ENST00000380469 TOB1P50616 345 aaPredicted RBP18.73■□□□□ 0.59
VPS16-203ENST00000380469 MDM2Q00987 491 aaPredicted RBP18.73■□□□□ 0.59
VPS16-203ENST00000380469 SPECC1Q5M775 1068 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 CRACR2BQ8N4Y2 399 aaPredicted RBP18.73■□□□□ 0.59
VPS16-203ENST00000380469 L2HGDHQ9H9P8 463 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 SEC31BQ9NQW1 1179 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 DACH1Q9UI36 760 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 CEP131Q9UPN4 1083 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 PTPREP23469 700 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 IGHMBP2P38935 993 aaKnown RBP18.73■□□□□ 0.59
VPS16-203ENST00000380469 BCAMP50895 628 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 POSTNQ15063 836 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 CCDC152Q4G0S7 254 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 DOCK2Q92608 1830 aa18.73■□□□□ 0.59
VPS16-203ENST00000380469 TIAM2Q8IVF5 1701 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 RCAN1P53805 252 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 ELF2Q15723 593 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 NOL10Q9BSC4 688 aaKnown RBP18.72■□□□□ 0.59
VPS16-203ENST00000380469 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
VPS16-203ENST00000380469 POLR2DO15514 142 aaKnown RBP18.72■□□□□ 0.59
VPS16-203ENST00000380469 KANK3Q6NY19 840 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
VPS16-203ENST00000380469 FANCBQ8NB91 859 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 NUP133Q8WUM0 1156 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 UBAC1Q9BSL1 405 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 MAN1B1Q9UKM7 699 aa18.72■□□□□ 0.59
VPS16-203ENST00000380469 FOXN1O15353 648 aa18.71■□□□□ 0.59
VPS16-203ENST00000380469 KMT5BQ4FZB7 885 aa18.71■□□□□ 0.59
VPS16-203ENST00000380469 MIGA1Q8NAN2 632 aa18.71■□□□□ 0.59
VPS16-203ENST00000380469 MLKLQ8NB16 471 aa18.71■□□□□ 0.59
VPS16-203ENST00000380469 SMARCE1Q969G3 411 aa18.71■□□□□ 0.59
VPS16-203ENST00000380469 MORC2Q9Y6X9 1032 aaPredicted RBP18.71■□□□□ 0.59
VPS16-203ENST00000380469 DISP2A7MBM2 1401 aa18.71■□□□□ 0.59
VPS16-203ENST00000380469 CDK11BP21127 795 aaKnown RBP18.71■□□□□ 0.58
VPS16-203ENST00000380469 EIF5P55010 431 aaKnown RBP18.71■□□□□ 0.58
VPS16-203ENST00000380469 ETF1P62495 437 aaKnown RBP18.71■□□□□ 0.58
VPS16-203ENST00000380469 PDE4BQ07343 736 aa18.71■□□□□ 0.58
VPS16-203ENST00000380469 ZNF654Q8IZM8 581 aa18.71■□□□□ 0.58
VPS16-203ENST00000380469 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 BMP6P22004 513 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 AKAP17AQ02040 695 aaKnown RBP18.7■□□□□ 0.58
VPS16-203ENST00000380469 PPARAQ07869 468 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 PARP10Q53GL7 1025 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 FCHSD1Q86WN1 690 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 SERTAD1Q9UHV2 236 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 SRPRBQ9Y5M8 271 aaKnown RBP18.7■□□□□ 0.58
VPS16-203ENST00000380469 PHLPP2Q6ZVD8 1323 aa18.7■□□□□ 0.58
VPS16-203ENST00000380469 TMEM232C9JQI7 657 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 CCDC93Q567U6 631 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 NT5DC1Q5TFE4 455 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
VPS16-203ENST00000380469 PCDHB6Q9Y5E3 794 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 XBP1P17861 261 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 CYP7A1P22680 504 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 NR5A1Q13285 461 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 PPP2R5BQ15173 497 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 TRIML1Q8N9V2 468 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
VPS16-203ENST00000380469 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
VPS16-203ENST00000380469 MINDY4BA8MYZ0 360 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 GRIN1Q05586 938 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 ENOX1Q8TC92 643 aaKnown RBP18.68■□□□□ 0.58
VPS16-203ENST00000380469 ESR2Q92731 530 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 CCDC34Q96HJ3 373 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 CABP5Q9NP86 173 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 DNAI1Q9UI46 699 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.68■□□□□ 0.58
VPS16-203ENST00000380469 ARHGAP6O43182 974 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 ATP2B1P20020 1258 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 SARSP49591 514 aaKnown RBP18.68■□□□□ 0.58
VPS16-203ENST00000380469 FBXO38Q6PIJ6 1188 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
VPS16-203ENST00000380469 SLIT2O94813 1529 aa18.67■□□□□ 0.58
VPS16-203ENST00000380469 NPHP1O15259 732 aa18.67■□□□□ 0.58
VPS16-203ENST00000380469 CHRNDQ07001 517 aa18.67■□□□□ 0.58
VPS16-203ENST00000380469 MORC3Q14149 939 aa18.67■□□□□ 0.58
VPS16-203ENST00000380469 INTS5Q6P9B9 1019 aaKnown RBP18.67■□□□□ 0.58
VPS16-203ENST00000380469 PDILTQ8N807 584 aa18.67■□□□□ 0.58
VPS16-203ENST00000380469 RNF26Q9BY78 433 aaPredicted RBP18.67■□□□□ 0.58
VPS16-203ENST00000380469 NFE2L3Q9Y4A8 694 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms